Cow genome map

Conread name: Liv1-LVRM1D010191

Conread position: 1-184
Cow position: chr14:13462079-13462258 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 27

Conread position: 1-223
Cow position: chr14:35385580-35385357 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 177

Conread position: 1-234
Cow position: chr14:29775726-29775488 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-352
Cow position: chr14:21586689-21587030 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 221
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 201, 17

Conread position: 1-367
Cow position: chr14:44378293-44378658 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 1-371
Cow position: chr14:11561540-11561160 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 205

Conread position: 1-411
Cow position: chr14:38530967-38530549 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 194

Conread position: 1-552
Cow position: chr14:17760387-17759837 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 174

Conread position: 1-552
Cow position: chr14:21128165-21128703 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 1-552
Cow position: chr14:29580665-29581214 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 1-552
Cow position: chr14:44226890-44227427 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 166

Conread position: 1-552
Cow position: chr14:45711223-45710678 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 2-542
Cow position: chr14:48825774-48826322 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 194

Conread position: 2-552
Cow position: chr14:40341543-40342111 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 404

Conread position: 3-321
Cow position: chr14:23257847-23258170 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 243

Conread position: 3-416
Cow position: chr14:37413251-37412835 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 3-438
Cow position: chr14:44676610-44677043 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 3-524
Cow position: chr14:45206816-45207319 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 111

Conread position: 3-542
Cow position: chr14:29047193-29046643 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-550
Cow position: chr14:46392039-46391489 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position: chr14:9046068-9046629 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 3-552
Cow position: chr14:17490966-17490407 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 274

Conread position: 3-552
Cow position: chr14:33677556-33678114 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 337

Conread position: 3-552
Cow position: chr14:38147501-38148049 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 189

Conread position: 3-552
Cow position: chr14:40169220-40168685 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 39

Conread position: 3-552
Cow position: chr14:44775543-44774990 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 3-552
Cow position: chr14:45671554-45670985 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr14:50139057-50139615 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 5-324
Cow position: chr14:37455563-37455249 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 5-485
Cow position: chr14:33402183-33402665 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 5-541
Cow position: chr14:13620656-13620102 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 536

Conread position: 5-552
Cow position: chr14:17000564-17000006 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 6-319
Cow position: chr14:15275732-15275421 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 15

Conread position: 6-319
Cow position: chr14:17685895-17686211 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-324
Cow position: chr14:190463-190784 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 6-478
Cow position: chr14:32447292-32447762 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-535
Cow position: chr14:12742571-12742036 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position: chr14:5529564-5530108 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 286

Conread position: 6-552
Cow position: chr14:7472853-7473402 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 231

Conread position: 6-552
Cow position: chr14:11153661-11153099 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 6-552
Cow position: chr14:13274099-13274656 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 6-552
Cow position: chr14:16272800-16272245 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 6-552
Cow position: chr14:19327773-19327212 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 320

Conread position: 6-552
Cow position: chr14:20782958-20783518 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 168

Conread position: 6-552
Cow position: chr14:43558734-43559286 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 115

Conread position: 6-552
Cow position: chr14:44689551-44690122 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 525

Conread position: 6-552
Cow position: chr14:45081546-45082106 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 514

Conread position: 6-552
Cow position: chr14:48253815-48253264 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 8-489
Cow position: chr14:44581853-44582354 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 248

Conread position: 8-552
Cow position: chr14:5074466-5075003 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 9-319
Cow position: chr14:33237526-33237832 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 9-516
Cow position: chr14:37224690-37225206 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 187

Conread position: 9-527
Cow position: chr14:12899595-12900120 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 9-552
Cow position: chr14:50111291-50111852 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 259

Conread position: 10-552
Cow position: chr14:13779439-13780002 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 10-552
Cow position: chr14:22030940-22030395 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 19

Conread position: 11-552
Cow position: chr14:13863596-13863046 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 300

Conread position: 11-552
Cow position: chr14:33797994-33798529 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 352
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 10

Conread position: 12-552
Cow position: chr14:16919212-16918667 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 181

Conread position: 30-238
Cow position: chr14:48404449-48404240 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 39-550
Cow position: chr14:30595835-30595306 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 42-263
Cow position: chr14:44131419-44131640 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 157, 138

Conread position: 53-552
Cow position: chr14:30666048-30666527 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 12

Conread position: 60-516
Cow position: chr14:48601788-48601324 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 272

Conread position: 65-550
Cow position: chr14:45028432-45027957 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 22

Conread position: 74-552
Cow position: chr14:24997017-24996543 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 115

Conread position: 88-551
Cow position: chr14:37984168-37984632 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 304
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 222, 86

Conread position: 129-552
Cow position: chr14:13303593-13304003 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 64

Conread position: 155-549
Cow position: chr14:44256100-44255710 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 156-349
Cow position: chr14:44286025-44285827 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 18

Conread position: 162-552
Cow position: chr14:1659110-1659506 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 30

Conread position: 179-546
Cow position: chr14:12340974-12340605 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 240
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 131

Conread position: 179-552
Cow position: chr14:46466365-46466718 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 183-491
Cow position: chr14:16343145-16342837 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 186
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 94

Conread position: 190-352
Cow position: chr14:25366113-25365944 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 191-368
Cow position: chr14:46657611-46657788 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 96

Conread position: 214-552
Cow position: chr14:44552559-44552889 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 230-552
Cow position: chr14:13462243-13462572 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 235-552
Cow position: chr14:30735896-30736221 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 237-523
Cow position: chr14:29775352-29775054 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 251-552
Cow position: chr14:12124441-12124132 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 283-552
Cow position: chr14:20910437-20910698 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 147

Conread position: 301-517
Cow position: chr14:2951766-2951546 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 311-552
Cow position: chr14:23256551-23256313 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 124

Conread position: 315-550
Cow position: chr14:37455105-37454881 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 83

Conread position: 321-552
Cow position: chr14:13579207-13579434 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 116

Conread position: 328-552
Cow position: chr14:190865-191096 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 42, 189

Conread position: 415-552
Cow position: chr14:47643212-47643343 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 97

Show alignments to all cow chromosomes.