Cow genome map

Conread name: Liv1-LVRM1D010191

Conread position: 1-184
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 27

Conread position: 1-223
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 177

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 1-352
Cow position:
Alignm length: 354
Alignm identity: 221
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 201, 17

Conread position: 1-367
Cow position:
Alignm length: 369
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 1-371
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 205

Conread position: 1-411
Cow position:
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 194

Conread position: 1-552
Cow position:
Alignm length: 564
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 174

Conread position: 1-552
Cow position:
Alignm length: 559
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 1-552
Cow position:
Alignm length: 566
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 79

Conread position: 1-552
Cow position:
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 166

Conread position: 1-552
Cow position:
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 2-542
Cow position:
Alignm length: 556
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 194

Conread position: 2-552
Cow position:
Alignm length: 573
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 404

Conread position: 3-321
Cow position:
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 243

Conread position: 3-416
Cow position:
Alignm length: 422
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 120

Conread position: 3-438
Cow position:
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 3-524
Cow position:
Alignm length: 531
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 111

Conread position: 3-542
Cow position:
Alignm length: 553
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-550
Cow position:
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 114

Conread position: 3-552
Cow position:
Alignm length: 562
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 3-552
Cow position:
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 274

Conread position: 3-552
Cow position:
Alignm length: 566
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 337

Conread position: 3-552
Cow position:
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 189

Conread position: 3-552
Cow position:
Alignm length: 557
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 39

Conread position: 3-552
Cow position:
Alignm length: 561
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 54

Conread position: 3-552
Cow position:
Alignm length: 571
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position:
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 5-324
Cow position:
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 5-485
Cow position:
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 5-541
Cow position:
Alignm length: 557
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 536

Conread position: 5-552
Cow position:
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 191

Conread position: 6-319
Cow position:
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 15

Conread position: 6-319
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 6-324
Cow position:
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 191

Conread position: 6-478
Cow position:
Alignm length: 479
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-535
Cow position:
Alignm length: 541
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-552
Cow position:
Alignm length: 568
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 286

Conread position: 6-552
Cow position:
Alignm length: 564
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 231

Conread position: 6-552
Cow position:
Alignm length: 565
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 189

Conread position: 6-552
Cow position:
Alignm length: 566
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 6-552
Cow position:
Alignm length: 564
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 154

Conread position: 6-552
Cow position:
Alignm length: 566
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 320

Conread position: 6-552
Cow position:
Alignm length: 575
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 168

Conread position: 6-552
Cow position:
Alignm length: 558
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 115

Conread position: 6-552
Cow position:
Alignm length: 573
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 525

Conread position: 6-552
Cow position:
Alignm length: 562
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 514

Conread position: 6-552
Cow position:
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 8-489
Cow position:
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 248

Conread position: 8-552
Cow position:
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 9-319
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 9-516
Cow position:
Alignm length: 519
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 187

Conread position: 9-527
Cow position:
Alignm length: 531
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 12

Conread position: 9-552
Cow position:
Alignm length: 564
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 259

Conread position: 10-552
Cow position:
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 10-552
Cow position:
Alignm length: 554
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 19

Conread position: 11-552
Cow position:
Alignm length: 560
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 300

Conread position: 11-552
Cow position:
Alignm length: 556
Alignm identity: 352
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 10

Conread position: 12-552
Cow position:
Alignm length: 549
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 181

Conread position: 30-238
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 39-550
Cow position:
Alignm length: 536
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 42-263
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 157, 138

Conread position: 53-552
Cow position:
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 12

Conread position: 60-516
Cow position:
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 272

Conread position: 65-550
Cow position:
Alignm length: 494
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 22

Conread position: 74-552
Cow position:
Alignm length: 488
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 115

Conread position: 88-551
Cow position:
Alignm length: 474
Alignm identity: 304
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 222, 86

Conread position: 129-552
Cow position:
Alignm length: 432
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 64

Conread position: 155-549
Cow position:
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 34

Conread position: 156-349
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 18

Conread position: 162-552
Cow position:
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 30

Conread position: 179-546
Cow position:
Alignm length: 380
Alignm identity: 240
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 131

Conread position: 179-552
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 183-491
Cow position:
Alignm length: 311
Alignm identity: 186
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 94

Conread position: 190-352
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 191-368
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 96

Conread position: 214-552
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 230-552
Cow position:
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 235-552
Cow position:
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 237-523
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 251-552
Cow position:
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 283-552
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 86, 147

Conread position: 301-517
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 311-552
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 124

Conread position: 315-550
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 83

Conread position: 321-552
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 48, 116

Conread position: 328-552
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 42, 189

Conread position: 415-552
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 97

Show alignments to all cow chromosomes.