Cow genome map

Conread name: Liv1-LVRM1D010191

Conread position: 1-135
Cow position:
Alignm length: 137
Alignm identity: 114
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 123

Conread position: 1-247
Cow position:
Alignm length: 251
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 124

Conread position: 1-360
Cow position:
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 123

Conread position: 1-514
Cow position:
Alignm length: 533
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 9

Conread position: 1-528
Cow position:
Alignm length: 542
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 192

Conread position: 1-552
Cow position:
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 1-552
Cow position:
Alignm length: 564
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 1-552
Cow position:
Alignm length: 566
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 173

Conread position: 1-552
Cow position:
Alignm length: 558
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 154

Conread position: 1-552
Cow position:
Alignm length: 565
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 1-552
Cow position:
Alignm length: 572
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 2-544
Cow position:
Alignm length: 554
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 280

Conread position: 2-552
Cow position:
Alignm length: 570
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 192

Conread position: 3-188
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 3-235
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 23

Conread position: 3-240
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 23

Conread position: 3-454
Cow position:
Alignm length: 457
Alignm identity: 301
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 15

Conread position: 3-503
Cow position:
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-549
Cow position:
Alignm length: 572
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 73

Conread position: 3-549
Cow position:
Alignm length: 557
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 47

Conread position: 3-551
Cow position:
Alignm length: 561
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 3-552
Cow position:
Alignm length: 563
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 115

Conread position: 3-552
Cow position:
Alignm length: 572
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 165

Conread position: 3-552
Cow position:
Alignm length: 565
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 312

Conread position: 3-552
Cow position:
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 80

Conread position: 3-552
Cow position:
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 4-551
Cow position:
Alignm length: 555
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 193

Conread position: 4-552
Cow position:
Alignm length: 573
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 35

Conread position: 5-550
Cow position:
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 129

Conread position: 5-552
Cow position:
Alignm length: 566
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 5-552
Cow position:
Alignm length: 561
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 6-188
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 0

Conread position: 6-199
Cow position:
Alignm length: 195
Alignm identity: 155
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 190, 175

Conread position: 6-319
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 147

Conread position: 6-322
Cow position:
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 75

Conread position: 6-413
Cow position:
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 108

Conread position: 6-441
Cow position:
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-488
Cow position:
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 167

Conread position: 6-546
Cow position:
Alignm length: 569
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 23

Conread position: 6-551
Cow position:
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 6-551
Cow position:
Alignm length: 555
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position:
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 6-552
Cow position:
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 296

Conread position: 6-552
Cow position:
Alignm length: 571
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position:
Alignm length: 571
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 23

Conread position: 6-552
Cow position:
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 294

Conread position: 6-552
Cow position:
Alignm length: 559
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position:
Alignm length: 560
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 300

Conread position: 6-552
Cow position:
Alignm length: 564
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 6-552
Cow position:
Alignm length: 559
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 6-552
Cow position:
Alignm length: 560
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 513

Conread position: 6-552
Cow position:
Alignm length: 559
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 8-552
Cow position:
Alignm length: 560
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 188

Conread position: 9-295
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 9-356
Cow position:
Alignm length: 351
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 125

Conread position: 9-552
Cow position:
Alignm length: 556
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 188

Conread position: 10-306
Cow position:
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 139

Conread position: 10-552
Cow position:
Alignm length: 552
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 183

Conread position: 11-410
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 175

Conread position: 11-552
Cow position:
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 185

Conread position: 21-268
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 139

Conread position: 21-323
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 64

Conread position: 30-549
Cow position:
Alignm length: 528
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 56

Conread position: 31-552
Cow position:
Alignm length: 530
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 264

Conread position: 37-488
Cow position:
Alignm length: 460
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 36

Conread position: 39-456
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 154

Conread position: 39-552
Cow position:
Alignm length: 522
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 115

Conread position: 39-552
Cow position:
Alignm length: 530
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 24

Conread position: 39-552
Cow position:
Alignm length: 524
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 116

Conread position: 68-552
Cow position:
Alignm length: 501
Alignm identity: 319
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 125, 106

Conread position: 72-368
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 0

Conread position: 88-515
Cow position:
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 91-424
Cow position:
Alignm length: 340
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 98

Conread position: 95-552
Cow position:
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 23

Conread position: 103-552
Cow position:
Alignm length: 456
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 51

Conread position: 107-552
Cow position:
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 227

Conread position: 111-552
Cow position:
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 156

Conread position: 131-552
Cow position:
Alignm length: 440
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 156-539
Cow position:
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 33

Conread position: 156-552
Cow position:
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 237

Conread position: 171-541
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 28

Conread position: 171-552
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 40

Conread position: 194-516
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 255

Conread position: 205-552
Cow position:
Alignm length: 362
Alignm identity: 240
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 248-552
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 28, 53

Conread position: 260-552
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 273-551
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 112

Conread position: 286-552
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 15

Conread position: 295-551
Cow position:
Alignm length: 268
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 223

Conread position: 306-552
Cow position:
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 10, 215

Conread position: 320-552
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 134

Conread position: 332-552
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 38, 184

Conread position: 340-552
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 30, 130

Conread position: 356-552
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 107, 5

Conread position: 405-552
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 123, 55

Show alignments to all cow chromosomes.