Cow genome map


           Conread name:
           Liv1-LVRM1D010191
        

               Conread position:
               1-117
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-501
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 29
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 275
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 145
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               2-169
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               2-499
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               3-168
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               3-205
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               37, 187
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               39, 116
               

               Conread position:
               3-538
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 192
               

               Conread position:
               3-546
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 16
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 142
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 122
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 192
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 128
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 365
               

               Conread position:
               4-321
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 179
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 196
               

               Conread position:
               6-437
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-458
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               6-545
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 187
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 23
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 292
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 151
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 454
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 184
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 186
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 197
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 184
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 196
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 308
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 191
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 330
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 120
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 205
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 101
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 185
               

               Conread position:
               7-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 189
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               10-551
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               12-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               15-549
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 175
               

               Conread position:
               21-552
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 170
               

               Conread position:
               34-551
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 267
               

               Conread position:
               34-552
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 147
               

               Conread position:
               39-525
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 148
               

               Conread position:
               39-546
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 150
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 23
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               332
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               165, 135
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 149
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               342
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               236, 82
               

               Conread position:
               71-295
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               74-370
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 119
               

               Conread position:
               76-552
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 115
               

               Conread position:
               139-541
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 35
               

               Conread position:
               145-542
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 159
               

               Conread position:
               153-524
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               161-502
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               115, 18
               

               Conread position:
               164-552
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               181-407
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               182-552
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               183-480
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               225-550
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 302
               

               Conread position:
               229-552
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               32, 161
               

               Conread position:
               242-552
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 190
               

               Conread position:
               251-552
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 190
               

               Conread position:
               302-552
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 117
               

               Conread position:
               309-552
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               205, 21
               

               Conread position:
               328-552
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               332-552
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               370-552
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 67
               

               Conread position:
               384-552
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               386-552
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 124
               

               Conread position:
               395-552
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               396-552
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               73, 21
               
Show alignments to all cow chromosomes.