Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-489 |
| Cow position: | chr17:16121804-16121346 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 45 |
| Conread position: | 1-524 |
| Cow position: | chr17:3708061-3707527 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 1-546 |
| Cow position: | chr17:23323731-23323177 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 1-547 |
| Cow position: | chr17:54732-54170 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 126 |
| Conread position: | 1-552 |
| Cow position: | chr17:151176-150609 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 155 |
| Conread position: | 1-552 |
| Cow position: | chr17:4942008-4941450 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 1-552 |
| Cow position: | chr17:14040315-14039765 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 180 |
| Conread position: | 1-552 |
| Cow position: | chr17:15851414-15851973 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 158 |
| Conread position: | 1-552 |
| Cow position: | chr17:20087028-20086485 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 112 |
| Conread position: | 2-552 |
| Cow position: | chr17:20081143-20080600 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 76 |
| Conread position: | 3-185 |
| Cow position: | chr17:11025790-11025607 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 3-235 |
| Cow position: | chr17:42265690-42265917 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 3-364 |
| Cow position: | chr17:20488662-20489029 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 3-486 |
| Cow position: | chr17:16899583-16899093 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 175 |
| Conread position: | 3-536 |
| Cow position: | chr17:2262828-2263370 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 227 |
| Conread position: | 3-552 |
| Cow position: | chr17:239067-239592 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 185 |
| Conread position: | 3-552 |
| Cow position: | chr17:1657128-1656573 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 3-552 |
| Cow position: | chr17:3655570-3655012 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 3-552 |
| Cow position: | chr17:6120436-6120990 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 448 |
| Conread position: | 3-552 |
| Cow position: | chr17:15436516-15437064 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 178 |
| Conread position: | 3-552 |
| Cow position: | chr17:31767317-31766756 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-552 |
| Cow position: | chr17:43989222-43989784 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 193 |
| Conread position: | 4-552 |
| Cow position: | chr17:20403147-20403699 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 38 |
| Conread position: | 4-552 |
| Cow position: | chr17:24782883-24783442 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 191 |
| Conread position: | 5-368 |
| Cow position: | chr17:1880824-1881192 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 5-552 |
| Cow position: | chr17:4060823-4061385 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 6-127 |
| Cow position: | chr17:18102960-18102839 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-218 |
| Cow position: | chr17:38874355-38874572 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 38, 181 |
| Conread position: | 6-370 |
| Cow position: | chr17:14894888-14895265 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 91 |
| Conread position: | 6-516 |
| Cow position: | chr17:15324556-15325077 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 196 |
| Conread position: | 6-546 |
| Cow position: | chr17:5227345-5227897 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 6-551 |
| Cow position: | chr17:20099750-20099193 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 244 |
| Conread position: | 6-552 |
| Cow position: | chr17:250889-251417 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 6-552 |
| Cow position: | chr17:6069281-6069830 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 221 |
| Conread position: | 6-552 |
| Cow position: | chr17:6260584-6261141 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 388 |
| Conread position: | 6-552 |
| Cow position: | chr17:11086995-11086443 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 6-552 |
| Cow position: | chr17:14240225-14240785 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr17:19268102-19267547 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 195 |
| Conread position: | 6-552 |
| Cow position: | chr17:24029277-24028719 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr17:40805536-40806089 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 8-552 |
| Cow position: | chr17:18194538-18195068 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 171 |
| Conread position: | 9-261 |
| Cow position: | chr17:3642102-3641850 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 180 |
| Conread position: | 9-365 |
| Cow position: | chr17:31532950-31533297 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 11-552 |
| Cow position: | chr17:4082760-4083298 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 21-552 |
| Cow position: | chr17:2580360-2580902 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 128 |
| Conread position: | 31-428 |
| Cow position: | chr17:11689194-11689617 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 248 |
| Conread position: | 33-552 |
| Cow position: | chr17:2030884-2031397 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 146 |
| Conread position: | 39-263 |
| Cow position: | chr17:2092039-2091818 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 219, 91 |
| Conread position: | 72-552 |
| Cow position: | chr17:2174607-2175077 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 107 |
| Conread position: | 75-457 |
| Cow position: | chr17:22132999-22133380 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 72 |
| Conread position: | 104-552 |
| Cow position: | chr17:21418408-21418843 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 77 |
| Conread position: | 128-487 |
| Cow position: | chr17:4784000-4783645 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 141, 41 |
| Conread position: | 135-552 |
| Cow position: | chr17:2078141-2077714 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 54 |
| Conread position: | 155-534 |
| Cow position: | chr17:2149314-2149697 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 245-552 |
| Cow position: | chr17:33284867-33284565 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 193 |
| Conread position: | 246-540 |
| Cow position: | chr17:42266384-42266672 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 26, 222 |
| Conread position: | 256-489 |
| Cow position: | chr17:19609202-19608964 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 272-552 |
| Cow position: | chr17:14296273-14295991 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 93, 33 |
| Conread position: | 328-503 |
| Cow position: | chr17:4208450-4208616 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 110, 41 |
| Conread position: | 399-552 |
| Cow position: | chr17:3640774-3640624 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 50 |
Show alignments to all cow chromosomes.