Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-474 |
| Cow position: | chr19:3138866-3139344 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 352 |
| Conread position: | 1-550 |
| Cow position: | chr19:40886810-40886243 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 136 |
| Conread position: | 1-552 |
| Cow position: | chr19:162205-161641 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 1-552 |
| Cow position: | chr19:1588278-1587748 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 1-552 |
| Cow position: | chr19:28405772-28405216 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 1-552 |
| Cow position: | chr19:44036903-44037465 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 360 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 2-550 |
| Cow position: | chr19:135856-135308 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 191 |
| Conread position: | 3-202 |
| Cow position: | chr19:190314-190521 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 3-439 |
| Cow position: | chr19:167633-167178 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 3-552 |
| Cow position: | chr19:39235-39791 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 160 |
| Conread position: | 3-552 |
| Cow position: | chr19:5900565-5900016 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 187 |
| Conread position: | 5-551 |
| Cow position: | chr19:28594490-28595028 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 5-552 |
| Cow position: | chr19:50723492-50724045 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 6-357 |
| Cow position: | chr19:51674162-51673818 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 6-368 |
| Cow position: | chr19:2273442-2273077 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 187 |
| Conread position: | 6-551 |
| Cow position: | chr19:27036649-27036133 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 6-552 |
| Cow position: | chr19:173173-173751 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 533 |
| Conread position: | 6-552 |
| Cow position: | chr19:438498-437946 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr19:4386564-4387105 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 175 |
| Conread position: | 6-552 |
| Cow position: | chr19:5729813-5730348 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 140 |
| Conread position: | 6-552 |
| Cow position: | chr19:12774058-12774597 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 185 |
| Conread position: | 6-552 |
| Cow position: | chr19:28580718-28580179 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 120 |
| Conread position: | 6-552 |
| Cow position: | chr19:33874366-33874908 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 184 |
| Conread position: | 6-552 |
| Cow position: | chr19:39391449-39392012 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr19:40851509-40850966 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 8-552 |
| Cow position: | chr19:7489287-7489851 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 347 |
| Conread position: | 9-317 |
| Cow position: | chr19:204924-205239 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 11-306 |
| Cow position: | chr19:33942550-33942853 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 11-371 |
| Cow position: | chr19:75316-74954 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 12-552 |
| Cow position: | chr19:342165-342720 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 387 |
| Conread position: | 21-462 |
| Cow position: | chr19:39096109-39096542 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 12 |
| Conread position: | 33-334 |
| Cow position: | chr19:23376795-23377085 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 39-552 |
| Cow position: | chr19:7343043-7343563 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 153 |
| Conread position: | 40-541 |
| Cow position: | chr19:52842543-52843028 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 327 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 55-514 |
| Cow position: | chr19:25924319-25924781 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 138 |
| Conread position: | 59-360 |
| Cow position: | chr19:32220624-32220309 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 123, 68 |
| Conread position: | 61-552 |
| Cow position: | chr19:892626-892142 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 128 |
| Conread position: | 69-552 |
| Cow position: | chr19:30756216-30756710 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 115 |
| Conread position: | 104-551 |
| Cow position: | chr19:6713668-6713245 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 78 |
| Conread position: | 108-516 |
| Cow position: | chr19:1656475-1656896 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 261, 71 |
| Conread position: | 114-552 |
| Cow position: | chr19:256306-256758 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 408 |
| Conread position: | 131-552 |
| Cow position: | chr19:40816450-40816016 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 136-411 |
| Cow position: | chr19:24294182-24294462 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 150-552 |
| Cow position: | chr19:9707074-9706678 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 291 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 74 |
| Conread position: | 170-552 |
| Cow position: | chr19:52150581-52150189 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 185-365 |
| Cow position: | chr19:264515-264700 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 199-552 |
| Cow position: | chr19:33653593-33653236 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 239 |
| Conread position: | 208-552 |
| Cow position: | chr19:39667387-39667045 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 192 |
| Conread position: | 209-552 |
| Cow position: | chr19:5249599-5249239 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 219-503 |
| Cow position: | chr19:3173968-3174260 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 256-552 |
| Cow position: | chr19:788595-788890 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 184 |
| Conread position: | 286-482 |
| Cow position: | chr19:21339499-21339293 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 84, 103 |
| Conread position: | 292-552 |
| Cow position: | chr19:44031608-44031870 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 121, 75 |
| Conread position: | 351-552 |
| Cow position: | chr19:33942857-33943064 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 368-552 |
| Cow position: | chr19:16319322-16319136 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 369-539 |
| Cow position: | chr19:264959-265129 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 106 |
Show alignments to all cow chromosomes.