Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-239 |
| Cow position: | chr20:31498202-31497963 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 180 |
| Conread position: | 1-322 |
| Cow position: | chr20:10101808-10101481 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 276 |
| Conread position: | 1-544 |
| Cow position: | chr20:15066373-15066912 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 1-552 |
| Cow position: | chr20:13679153-13678591 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 1-552 |
| Cow position: | chr20:18314454-18313914 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 1-552 |
| Cow position: | chr20:24615974-24615438 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 266 |
| Conread position: | 2-540 |
| Cow position: | chr20:8216409-8216956 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 303 |
| Conread position: | 2-552 |
| Cow position: | chr20:5465944-5466470 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 3-275 |
| Cow position: | chr20:13433703-13433429 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 41, 93 |
| Conread position: | 3-552 |
| Cow position: | chr20:823656-824225 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 4-531 |
| Cow position: | chr20:14870052-14869530 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 4-552 |
| Cow position: | chr20:19438813-19439370 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 191 |
| Conread position: | 5-552 |
| Cow position: | chr20:13763806-13764350 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 188 |
| Conread position: | 6-551 |
| Cow position: | chr20:21394826-21395371 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 286 |
| Conread position: | 6-552 |
| Cow position: | chr20:5535834-5536398 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 155 |
| Conread position: | 6-552 |
| Cow position: | chr20:8367012-8366483 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 28 |
| Conread position: | 6-552 |
| Cow position: | chr20:12569420-12569957 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 186 |
| Conread position: | 6-552 |
| Cow position: | chr20:15096981-15096439 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 6-552 |
| Cow position: | chr20:15292902-15293436 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 163 |
| Conread position: | 6-552 |
| Cow position: | chr20:23468763-23468208 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr20:23799783-23800341 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 6-552 |
| Cow position: | chr20:25849928-25849367 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 110 |
| Conread position: | 6-552 |
| Cow position: | chr20:27870103-27870662 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr20:28161719-28162279 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 294 |
| Conread position: | 6-552 |
| Cow position: | chr20:28564690-28564139 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 6-552 |
| Cow position: | chr20:29949403-29949983 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 354 |
| Conread position: | 9-516 |
| Cow position: | chr20:35125398-35125912 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 10-371 |
| Cow position: | chr20:12437803-12437446 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 179 |
| Conread position: | 30-503 |
| Cow position: | chr20:35105701-35106186 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 39-541 |
| Cow position: | chr20:19355703-19356211 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 162 |
| Conread position: | 39-552 |
| Cow position: | chr20:32215968-32216465 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 325 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 324, 66 |
| Conread position: | 44-526 |
| Cow position: | chr20:27897105-27896603 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 334 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 121, 258 |
| Conread position: | 72-552 |
| Cow position: | chr20:38917330-38917807 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 188, 177 |
| Conread position: | 81-552 |
| Cow position: | chr20:30686547-30687030 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 437 |
| Conread position: | 103-546 |
| Cow position: | chr20:16178763-16178315 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 16 |
| Conread position: | 170-552 |
| Cow position: | chr20:9521066-9520682 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 177-552 |
| Cow position: | chr20:21915702-21916091 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 342 |
| Conread position: | 229-552 |
| Cow position: | chr20:17660621-17660287 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 288 |
| Conread position: | 272-503 |
| Cow position: | chr20:14742477-14742707 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 281-552 |
| Cow position: | chr20:9546849-9547106 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 328-552 |
| Cow position: | chr20:19340864-19341086 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 351-552 |
| Cow position: | chr20:33182887-33182686 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 158, 87 |
| Conread position: | 368-552 |
| Cow position: | chr20:12437152-12436967 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 95, 76 |
Show alignments to all cow chromosomes.