Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-366 |
| Cow position: | chr22:15313115-15312746 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 304 |
| Conread position: | 1-368 |
| Cow position: | chr22:41418478-41418117 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 184 |
| Conread position: | 1-387 |
| Cow position: | chr22:11032584-11032979 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-407 |
| Cow position: | chr22:37133491-37133900 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 228 |
| Conread position: | 1-411 |
| Cow position: | chr22:44477447-44477877 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 89 |
| Conread position: | 1-521 |
| Cow position: | chr22:1323049-1323568 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 38 |
| Conread position: | 1-552 |
| Cow position: | chr22:1281894-1281339 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 106 |
| Conread position: | 1-552 |
| Cow position: | chr22:8737493-8736954 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 189 |
| Conread position: | 1-552 |
| Cow position: | chr22:44397282-44397826 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 270 |
| Conread position: | 2-552 |
| Cow position: | chr22:12730846-12730301 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 3-543 |
| Cow position: | chr22:326331-325803 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 155 |
| Conread position: | 3-550 |
| Cow position: | chr22:37267999-37268560 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 3-552 |
| Cow position: | chr22:3803027-3803576 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 3-552 |
| Cow position: | chr22:6021501-6022059 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 189 |
| Conread position: | 3-552 |
| Cow position: | chr22:11804218-11803656 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-552 |
| Cow position: | chr22:16201765-16202308 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 190 |
| Conread position: | 3-552 |
| Cow position: | chr22:18028120-18028683 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 260 |
| Conread position: | 3-552 |
| Cow position: | chr22:20240004-20239444 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 3-552 |
| Cow position: | chr22:27308937-27308383 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 179 |
| Conread position: | 3-552 |
| Cow position: | chr22:44491872-44492450 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 4-552 |
| Cow position: | chr22:6502305-6501743 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 6-261 |
| Cow position: | chr22:31314188-31314444 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 187 |
| Conread position: | 6-527 |
| Cow position: | chr22:21590179-21590705 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-546 |
| Cow position: | chr22:34169180-34169729 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr22:559869-559310 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 513 |
| Conread position: | 6-552 |
| Cow position: | chr22:6332552-6333108 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 6-552 |
| Cow position: | chr22:13673969-13673411 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 6-552 |
| Cow position: | chr22:18815539-18814970 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 460 |
| Conread position: | 6-552 |
| Cow position: | chr22:19142848-19142285 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 6-552 |
| Cow position: | chr22:31334193-31333649 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 184 |
| Conread position: | 6-552 |
| Cow position: | chr22:36860691-36860153 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 6-552 |
| Cow position: | chr22:42992021-42992571 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 75 |
| Conread position: | 6-552 |
| Cow position: | chr22:44934814-44935363 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 187 |
| Conread position: | 8-261 |
| Cow position: | chr22:37072241-37071983 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 9-319 |
| Cow position: | chr22:44350818-44350505 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 214 |
| Conread position: | 9-552 |
| Cow position: | chr22:39468676-39468119 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 342 |
| Conread position: | 11-552 |
| Cow position: | chr22:46580891-46580323 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 440 |
| Conread position: | 12-356 |
| Cow position: | chr22:46612722-46613057 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 12-542 |
| Cow position: | chr22:35906535-35906006 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 59 |
| Conread position: | 12-552 |
| Cow position: | chr22:1520173-1519625 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 479 |
| Conread position: | 15-486 |
| Cow position: | chr22:15053573-15054036 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 75 |
| Conread position: | 15-552 |
| Cow position: | chr22:37292815-37292279 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 177 |
| Conread position: | 21-268 |
| Cow position: | chr22:41240231-41240471 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 21-550 |
| Cow position: | chr22:45510672-45510150 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 348 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 39-552 |
| Cow position: | chr22:36184635-36185152 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 205 |
| Conread position: | 48-295 |
| Cow position: | chr22:23770643-23770887 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 151, 68 |
| Conread position: | 77-552 |
| Cow position: | chr22:316418-316900 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 148 |
| Conread position: | 83-541 |
| Cow position: | chr22:40370372-40370819 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 131 |
| Conread position: | 95-552 |
| Cow position: | chr22:13773461-13773915 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 176 |
| Conread position: | 116-552 |
| Cow position: | chr22:44606718-44606287 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 118-480 |
| Cow position: | chr22:30677727-30677367 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 74 |
| Conread position: | 127-550 |
| Cow position: | chr22:34600315-34600737 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 130-552 |
| Cow position: | chr22:19536522-19536948 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 62 |
| Conread position: | 146-549 |
| Cow position: | chr22:1268773-1268361 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 150-552 |
| Cow position: | chr22:8121095-8120693 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 290 |
| Conread position: | 166-552 |
| Cow position: | chr22:35670644-35670270 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 185-552 |
| Cow position: | chr22:3305556-3305203 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 141 |
| Conread position: | 194-551 |
| Cow position: | chr22:21035357-21034996 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 65 |
| Conread position: | 250-551 |
| Cow position: | chr22:39689581-39689874 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 252-552 |
| Cow position: | chr22:7304566-7304259 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 259-546 |
| Cow position: | chr22:36579181-36578883 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 111, 192 |
| Conread position: | 281-552 |
| Cow position: | chr22:38550511-38550779 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 89, 27 |
| Conread position: | 282-481 |
| Cow position: | chr22:26536175-26536377 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 196 |
| Conread position: | 315-552 |
| Cow position: | chr22:19243558-19243792 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 428-552 |
| Cow position: | chr22:30128855-30128981 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 82 |
| Conread position: | 428-552 |
| Cow position: | chr22:30146504-30146630 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 82 |
Show alignments to all cow chromosomes.