Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-175 |
| Cow position: | chr24:29183073-29183250 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-209 |
| Cow position: | chr24:27147633-27147843 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 1-210 |
| Cow position: | chr24:11866326-11866115 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 39, 194 |
| Conread position: | 1-388 |
| Cow position: | chr24:6332772-6332381 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 307 |
| Conread position: | 1-551 |
| Cow position: | chr24:12238219-12238764 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 128 |
| Conread position: | 1-551 |
| Cow position: | chr24:14871391-14870849 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 1-552 |
| Cow position: | chr24:6337308-6337871 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 152 |
| Conread position: | 1-552 |
| Cow position: | chr24:9544987-9545536 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 1-552 |
| Cow position: | chr24:12205385-12204859 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 140 |
| Conread position: | 1-552 |
| Cow position: | chr24:14389620-14389057 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 57 |
| Conread position: | 1-552 |
| Cow position: | chr24:36558850-36558298 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 1-552 |
| Cow position: | chr24:38638459-38639007 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 193 |
| Conread position: | 2-479 |
| Cow position: | chr24:8151342-8150883 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 32 |
| Conread position: | 2-552 |
| Cow position: | chr24:6142018-6142557 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 68 |
| Conread position: | 2-552 |
| Cow position: | chr24:9091138-9090573 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 3-348 |
| Cow position: | chr24:6059824-6060169 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 39 |
| Conread position: | 3-514 |
| Cow position: | chr24:7090044-7089530 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 128 |
| Conread position: | 3-527 |
| Cow position: | chr24:6129759-6130276 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 39 |
| Conread position: | 3-552 |
| Cow position: | chr24:5992303-5991745 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 3-552 |
| Cow position: | chr24:6435403-6435964 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 3-552 |
| Cow position: | chr24:12699892-12699343 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 201 |
| Conread position: | 3-552 |
| Cow position: | chr24:19702409-19702975 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 3-552 |
| Cow position: | chr24:29305396-29304832 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-543 |
| Cow position: | chr24:16876271-16875734 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 299 |
| Conread position: | 6-270 |
| Cow position: | chr24:37200081-37199818 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 6-368 |
| Cow position: | chr24:12129140-12128772 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 6-440 |
| Cow position: | chr24:17696055-17695612 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-467 |
| Cow position: | chr24:22972018-22972485 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-485 |
| Cow position: | chr24:14754599-14755092 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 397 |
| Conread position: | 6-537 |
| Cow position: | chr24:12334831-12334285 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 195 |
| Conread position: | 6-538 |
| Cow position: | chr24:4414604-4414066 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 72 |
| Conread position: | 6-551 |
| Cow position: | chr24:19834319-19834884 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 193 |
| Conread position: | 6-552 |
| Cow position: | chr24:6406957-6407516 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 296 |
| Conread position: | 6-552 |
| Cow position: | chr24:12087134-12087680 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 15 |
| Conread position: | 6-552 |
| Cow position: | chr24:16097481-16098007 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 6-552 |
| Cow position: | chr24:29188218-29188775 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr24:33934300-33934869 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 524 |
| Conread position: | 9-552 |
| Cow position: | chr24:147679-147131 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 138 |
| Conread position: | 13-291 |
| Cow position: | chr24:36709299-36709582 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 31, 177 |
| Conread position: | 15-478 |
| Cow position: | chr24:17321640-17322114 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 344 |
| Conread position: | 39-514 |
| Cow position: | chr24:12109742-12109259 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 182 |
| Conread position: | 39-534 |
| Cow position: | chr24:12150350-12149853 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 172 |
| Conread position: | 39-552 |
| Cow position: | chr24:6659531-6659017 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 64 |
| Conread position: | 39-552 |
| Cow position: | chr24:13044668-13044147 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 153 |
| Conread position: | 39-552 |
| Cow position: | chr24:13189135-13189660 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 277 |
| Conread position: | 47-551 |
| Cow position: | chr24:6505853-6505368 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 314 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 155, 128 |
| Conread position: | 67-521 |
| Cow position: | chr24:1450421-1450861 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 71-552 |
| Cow position: | chr24:6353157-6353614 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 24 |
| Conread position: | 87-489 |
| Cow position: | chr24:6668795-6668407 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 46 |
| Conread position: | 103-546 |
| Cow position: | chr24:35869528-35869095 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 110 |
| Conread position: | 120-359 |
| Cow position: | chr24:43810000-43810234 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 141-552 |
| Cow position: | chr24:14383575-14383155 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 170-552 |
| Cow position: | chr24:13179926-13179538 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 133 |
| Conread position: | 197-552 |
| Cow position: | chr24:12163060-12163424 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 342 |
| Conread position: | 201-543 |
| Cow position: | chr24:36480832-36480497 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 194 |
| Conread position: | 215-552 |
| Cow position: | chr24:19640819-19641165 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 235-552 |
| Cow position: | chr24:37199735-37199421 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 285-552 |
| Cow position: | chr24:16561111-16560833 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 289-552 |
| Cow position: | chr24:38585908-38585637 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 347-552 |
| Cow position: | chr24:25437564-25437764 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 368-552 |
| Cow position: | chr24:10222874-10222693 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 148, 95 |
| Conread position: | 375-552 |
| Cow position: | chr24:6324049-6323874 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 17, 130 |
Show alignments to all cow chromosomes.