Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-132 |
| Cow position: | chr28:2085386-2085517 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-282 |
| Cow position: | chr28:3019834-3019538 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 281 |
| Conread position: | 1-387 |
| Cow position: | chr28:10072158-10072550 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 195 |
| Conread position: | 1-448 |
| Cow position: | chr28:5814258-5814691 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 1-542 |
| Cow position: | chr28:8720063-8719529 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 317 |
| Conread position: | 1-549 |
| Cow position: | chr28:21360368-21360929 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 1-551 |
| Cow position: | chr28:5799180-5799730 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 196 |
| Conread position: | 1-552 |
| Cow position: | chr28:1386512-1385965 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 189 |
| Conread position: | 1-552 |
| Cow position: | chr28:10646516-10645990 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 41 |
| Conread position: | 1-552 |
| Cow position: | chr28:24668503-24669042 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 2-298 |
| Cow position: | chr28:15684122-15684428 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-471 |
| Cow position: | chr28:7811333-7811781 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 188 |
| Conread position: | 2-552 |
| Cow position: | chr28:22260267-22259710 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 194 |
| Conread position: | 3-368 |
| Cow position: | chr28:29761045-29760676 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 3-406 |
| Cow position: | chr28:14751429-14751840 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 3-461 |
| Cow position: | chr28:24884092-24883634 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 266 |
| Conread position: | 3-552 |
| Cow position: | chr28:484708-484153 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 4-356 |
| Cow position: | chr28:2988197-2987846 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 208 |
| Conread position: | 5-552 |
| Cow position: | chr28:8379943-8380477 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 376 |
| Conread position: | 5-552 |
| Cow position: | chr28:17666419-17665867 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 191 |
| Conread position: | 6-306 |
| Cow position: | chr28:1217265-1216959 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 6-322 |
| Cow position: | chr28:5113408-5113090 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 6-356 |
| Cow position: | chr28:10581199-10580847 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 187 |
| Conread position: | 6-524 |
| Cow position: | chr28:1813975-1813464 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 6-531 |
| Cow position: | chr28:7741339-7741864 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 175 |
| Conread position: | 6-552 |
| Cow position: | chr28:783561-784103 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 6-552 |
| Cow position: | chr28:1166988-1166449 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 6-552 |
| Cow position: | chr28:1505758-1506307 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 6-552 |
| Cow position: | chr28:3191367-3190812 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr28:5567043-5567573 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 6-552 |
| Cow position: | chr28:5938373-5938928 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 6-552 |
| Cow position: | chr28:7002884-7003438 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 6-552 |
| Cow position: | chr28:12151194-12151770 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 79 |
| Conread position: | 6-552 |
| Cow position: | chr28:13460862-13461420 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 266 |
| Conread position: | 6-552 |
| Cow position: | chr28:14704499-14703945 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 6-552 |
| Cow position: | chr28:18519561-18519007 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 6-552 |
| Cow position: | chr28:26425367-26424818 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr28:29820884-29821439 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr28:32791487-32790951 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 8-508 |
| Cow position: | chr28:10460713-10460210 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 88 |
| Conread position: | 9-552 |
| Cow position: | chr28:12409334-12408785 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 9-552 |
| Cow position: | chr28:18146838-18146300 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 11-550 |
| Cow position: | chr28:5765635-5766169 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 169 |
| Conread position: | 12-552 |
| Cow position: | chr28:5750809-5750259 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 9 |
| Conread position: | 21-544 |
| Cow position: | chr28:12180171-12179664 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 342 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 39-486 |
| Cow position: | chr28:27678475-27678905 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 232, 17 |
| Conread position: | 45-552 |
| Cow position: | chr28:15035186-15034671 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 220 |
| Conread position: | 71-444 |
| Cow position: | chr28:10470464-10470839 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 73 |
| Conread position: | 81-522 |
| Cow position: | chr28:7788927-7788491 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 90-531 |
| Cow position: | chr28:10496558-10496113 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 147 |
| Conread position: | 168-552 |
| Cow position: | chr28:2085513-2085905 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 179-552 |
| Cow position: | chr28:21566516-21566898 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 218 |
| Conread position: | 182-550 |
| Cow position: | chr28:6778877-6778500 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 184-525 |
| Cow position: | chr28:22232209-22231859 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 186-552 |
| Cow position: | chr28:17381791-17381431 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 263-456 |
| Cow position: | chr28:698392-698591 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 166 |
| Conread position: | 271-552 |
| Cow position: | chr28:12648526-12648234 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 317-552 |
| Cow position: | chr28:1216634-1216391 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 384-549 |
| Cow position: | chr28:6786536-6786695 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 431-552 |
| Cow position: | chr28:10470984-10471105 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 24 |
Show alignments to all cow chromosomes.