Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-297 |
| Cow position: | chr29:28576522-28576233 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 260, 125 |
| Conread position: | 1-545 |
| Cow position: | chr29:23976972-23977526 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 287 |
| Conread position: | 1-549 |
| Cow position: | chr29:8664363-8664914 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 1-549 |
| Cow position: | chr29:14085280-14084727 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 272 |
| Conread position: | 1-552 |
| Cow position: | chr29:5981866-5981304 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 193 |
| Conread position: | 1-552 |
| Cow position: | chr29:39078857-39078307 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 2-552 |
| Cow position: | chr29:21426175-21425614 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 3-481 |
| Cow position: | chr29:35297682-35298154 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 202 |
| Conread position: | 3-546 |
| Cow position: | chr29:609772-609246 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 3-552 |
| Cow position: | chr29:13582931-13583485 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 3-552 |
| Cow position: | chr29:14448759-14449283 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 3-552 |
| Cow position: | chr29:32558904-32558347 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 195 |
| Conread position: | 4-481 |
| Cow position: | chr29:2949494-2949025 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 26 |
| Conread position: | 4-552 |
| Cow position: | chr29:32891647-32892186 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 5-472 |
| Cow position: | chr29:39368727-39369187 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 39, 62 |
| Conread position: | 5-530 |
| Cow position: | chr29:32287053-32287572 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 34 |
| Conread position: | 6-132 |
| Cow position: | chr29:14216822-14216948 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-237 |
| Cow position: | chr29:2840524-2840288 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-322 |
| Cow position: | chr29:6265421-6265095 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-502 |
| Cow position: | chr29:43323413-43323910 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 276 |
| Conread position: | 6-516 |
| Cow position: | chr29:7430365-7429842 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 6-516 |
| Cow position: | chr29:10823120-10822611 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 6-543 |
| Cow position: | chr29:8774455-8773908 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 6-550 |
| Cow position: | chr29:19654485-19655026 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 146 |
| Conread position: | 6-551 |
| Cow position: | chr29:25931687-25931123 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 453 |
| Conread position: | 6-552 |
| Cow position: | chr29:2100702-2101243 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 6-552 |
| Cow position: | chr29:10647393-10646846 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 187 |
| Conread position: | 6-552 |
| Cow position: | chr29:14210715-14210144 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 184 |
| Conread position: | 6-552 |
| Cow position: | chr29:15997812-15997246 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 453 |
| Conread position: | 6-552 |
| Cow position: | chr29:19622430-19621873 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 6-552 |
| Cow position: | chr29:26163973-26163430 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 133 |
| Conread position: | 6-552 |
| Cow position: | chr29:32540948-32541505 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 6-552 |
| Cow position: | chr29:34798951-34798407 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 28 |
| Conread position: | 6-552 |
| Cow position: | chr29:40502124-40501594 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 182 |
| Conread position: | 6-552 |
| Cow position: | chr29:45205356-45205915 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 149 |
| Conread position: | 6-552 |
| Cow position: | chr29:45460577-45461151 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 9-481 |
| Cow position: | chr29:45586519-45586051 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 182 |
| Conread position: | 9-552 |
| Cow position: | chr29:14586777-14587323 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 266 |
| Conread position: | 10-552 |
| Cow position: | chr29:20252022-20252564 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 425 |
| Conread position: | 11-552 |
| Cow position: | chr29:2747573-2747045 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 149 |
| Conread position: | 11-552 |
| Cow position: | chr29:13650916-13651442 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 18-421 |
| Cow position: | chr29:27263029-27262625 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 31-302 |
| Cow position: | chr29:8061247-8060974 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 39-484 |
| Cow position: | chr29:42803300-42803750 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 186 |
| Conread position: | 45-541 |
| Cow position: | chr29:47544-47034 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 138 |
| Conread position: | 66-552 |
| Cow position: | chr29:2465951-2465449 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 289 |
| Conread position: | 86-552 |
| Cow position: | chr29:16023506-16023968 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 94 |
| Conread position: | 130-552 |
| Cow position: | chr29:42939219-42938788 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 156-368 |
| Cow position: | chr29:16173228-16173007 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 34 |
| Conread position: | 162-531 |
| Cow position: | chr29:18397231-18397604 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 175-552 |
| Cow position: | chr29:38207650-38207260 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 185-549 |
| Cow position: | chr29:3698992-3699354 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 185-549 |
| Cow position: | chr29:10849786-10850150 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 132 |
| Conread position: | 213-552 |
| Cow position: | chr29:2840277-2839938 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 216-546 |
| Cow position: | chr29:32804486-32804810 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 287-551 |
| Cow position: | chr29:9642654-9642384 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 321-552 |
| Cow position: | chr29:2691336-2691567 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 109 |
| Conread position: | 373-552 |
| Cow position: | chr29:12793458-12793629 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 375-552 |
| Cow position: | chr29:647052-647218 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 377-552 |
| Cow position: | chr29:21431625-21431447 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 400-552 |
| Cow position: | chr29:10023082-10022928 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 416-551 |
| Cow position: | chr29:27262449-27262311 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 37, 95 |
Show alignments to all cow chromosomes.