Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-188 |
| Cow position: | chr4:34183970-34183780 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 1-223 |
| Cow position: | chr4:19005986-19005758 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-513 |
| Cow position: | chr4:27300911-27300403 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 176 |
| Conread position: | 1-551 |
| Cow position: | chr4:11110694-11110155 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 177 |
| Conread position: | 1-552 |
| Cow position: | chr4:28832130-28832670 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 1-552 |
| Cow position: | chr4:46665088-46665661 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 169 |
| Conread position: | 1-552 |
| Cow position: | chr4:60263595-60263034 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 134 |
| Conread position: | 3-523 |
| Cow position: | chr4:41333279-41333783 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 40 |
| Conread position: | 3-536 |
| Cow position: | chr4:6206167-6206710 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 3-552 |
| Cow position: | chr4:159730-160282 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 448 |
| Conread position: | 3-552 |
| Cow position: | chr4:3126364-3126933 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 3-552 |
| Cow position: | chr4:4416643-4417184 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 174 |
| Conread position: | 3-552 |
| Cow position: | chr4:5444264-5443702 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 3-552 |
| Cow position: | chr4:5880734-5881286 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 28 |
| Conread position: | 3-552 |
| Cow position: | chr4:32212741-32213292 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 267 |
| Conread position: | 3-552 |
| Cow position: | chr4:33596114-33596657 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 360, 61 |
| Conread position: | 3-552 |
| Cow position: | chr4:41955325-41955886 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 321 |
| Conread position: | 4-183 |
| Cow position: | chr4:100231-100049 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 4-552 |
| Cow position: | chr4:17093293-17092739 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 188 |
| Conread position: | 5-552 |
| Cow position: | chr4:44780651-44780097 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 188 |
| Conread position: | 6-142 |
| Cow position: | chr4:29531305-29531170 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 6-259 |
| Cow position: | chr4:48026978-48027239 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 250 |
| Conread position: | 6-261 |
| Cow position: | chr4:31669851-31670118 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 6-512 |
| Cow position: | chr4:16360487-16361006 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 193 |
| Conread position: | 6-549 |
| Cow position: | chr4:6489788-6489232 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-551 |
| Cow position: | chr4:43881681-43882232 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 6-552 |
| Cow position: | chr4:356485-357032 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 6-552 |
| Cow position: | chr4:1049689-1049134 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 214 |
| Conread position: | 6-552 |
| Cow position: | chr4:10882122-10882677 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 185 |
| Conread position: | 6-552 |
| Cow position: | chr4:12240635-12240097 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 59 |
| Conread position: | 6-552 |
| Cow position: | chr4:12587908-12588455 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 138 |
| Conread position: | 6-552 |
| Cow position: | chr4:13493894-13494453 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 446 |
| Conread position: | 6-552 |
| Cow position: | chr4:16639186-16639733 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 6-552 |
| Cow position: | chr4:17925386-17924838 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 187 |
| Conread position: | 6-552 |
| Cow position: | chr4:25598921-25598362 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 137 |
| Conread position: | 6-552 |
| Cow position: | chr4:31564730-31564160 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 103 |
| Conread position: | 6-552 |
| Cow position: | chr4:33072245-33071698 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 6-552 |
| Cow position: | chr4:36896948-36897503 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 186 |
| Conread position: | 6-552 |
| Cow position: | chr4:43319067-43318512 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr4:44726172-44726705 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 183 |
| Conread position: | 6-552 |
| Cow position: | chr4:57984557-57985115 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 512 |
| Conread position: | 6-552 |
| Cow position: | chr4:67681767-67682320 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 206 |
| Conread position: | 9-475 |
| Cow position: | chr4:27294740-27294255 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 30-552 |
| Cow position: | chr4:44924924-44924409 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 138 |
| Conread position: | 39-527 |
| Cow position: | chr4:54969331-54969828 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 53 |
| Conread position: | 39-552 |
| Cow position: | chr4:37813-37312 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 66 |
| Conread position: | 42-442 |
| Cow position: | chr4:69505115-69505509 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 150, 88 |
| Conread position: | 53-480 |
| Cow position: | chr4:69521188-69521592 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 66 |
| Conread position: | 77-547 |
| Cow position: | chr4:64984970-64985431 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 49 |
| Conread position: | 87-549 |
| Cow position: | chr4:47462475-47462942 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 92 |
| Conread position: | 94-552 |
| Cow position: | chr4:9847559-9847085 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 179 |
| Conread position: | 126-552 |
| Cow position: | chr4:34178541-34178112 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 67 |
| Conread position: | 131-552 |
| Cow position: | chr4:26877079-26876654 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 62 |
| Conread position: | 181-516 |
| Cow position: | chr4:14755903-14755574 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 193-549 |
| Cow position: | chr4:68110271-68109907 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 314 |
| Conread position: | 216-552 |
| Cow position: | chr4:19005526-19005190 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 216-552 |
| Cow position: | chr4:42405390-42405735 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 116 |
| Conread position: | 252-547 |
| Cow position: | chr4:34183803-34183523 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 289-552 |
| Cow position: | chr4:41191744-41191475 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 246 |
| Conread position: | 368-552 |
| Cow position: | chr4:14138983-14139163 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 375-552 |
| Cow position: | chr4:33494495-33494678 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 137 |
Show alignments to all cow chromosomes.