Cow genome map


           Conread name:
           Liv1-LVRM1D010191
        

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-513
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 176
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 177
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 134
               

               Conread position:
               3-523
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 40
               

               Conread position:
               3-536
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 448
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 102
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 174
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 28
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 267
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 61
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 321
               

               Conread position:
               4-183
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               4-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 188
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 188
               

               Conread position:
               6-142
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               6-259
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 250
               

               Conread position:
               6-261
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               6-512
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 193
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-551
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 178
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 214
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 185
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 59
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 138
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 446
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 187
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 137
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 103
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 186
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 183
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 512
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 206
               

               Conread position:
               9-475
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               30-552
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 138
               

               Conread position:
               39-527
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 66
               

               Conread position:
               42-442
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               150, 88
               

               Conread position:
               53-480
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 66
               

               Conread position:
               77-547
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 49
               

               Conread position:
               87-549
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 92
               

               Conread position:
               94-552
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 179
               

               Conread position:
               126-552
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               131-552
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 62
               

               Conread position:
               181-516
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               188, 20
               

               Conread position:
               193-549
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 314
               

               Conread position:
               216-552
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               216-552
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               252-547
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               289-552
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 246
               

               Conread position:
               368-552
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               375-552
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 137
               
Show alignments to all cow chromosomes.