Cow genome map


           Conread name:
           Liv1-LVRM1D010191
        

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               1-257
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 190
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 269
               

               Conread position:
               1-459
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 171
               

               Conread position:
               1-542
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 549
               

               Conread position:
               1-543
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 428
               

               Conread position:
               1-544
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 156
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 149
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 68
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 139
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 180
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 73
               

               Conread position:
               3-288
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 138
               

               Conread position:
               3-306
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               19, 152
               

               Conread position:
               3-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 86
               

               Conread position:
               3-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 40
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               3-360
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 133
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 40
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               3-491
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 33
               

               Conread position:
               3-531
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 183
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 191
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 195
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 189
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 188
               

               Conread position:
               4-483
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 189
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               6-489
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               6-535
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 165
               

               Conread position:
               6-551
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 115
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 427
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 317
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 320
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 40
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 126
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 355
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 291
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 112
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 107
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 185
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 87
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 184
               

               Conread position:
               10-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               21-552
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 154
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 94
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 65
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 15
               

               Conread position:
               82-391
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 106
               

               Conread position:
               87-552
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 77
               

               Conread position:
               103-371
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 85
               

               Conread position:
               104-552
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               107-552
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               111-552
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 48
               

               Conread position:
               114-552
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 28
               

               Conread position:
               150-544
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               155-512
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               116, 136
               

               Conread position:
               169-322
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               177-552
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               180-512
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               203-552
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 98
               

               Conread position:
               205-531
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               51, 10
               

               Conread position:
               210-551
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 84
               

               Conread position:
               243-552
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               258-545
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               259-552
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 184
               

               Conread position:
               270-537
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               49, 260
               

               Conread position:
               278-462
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               301-552
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               308-552
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               315-552
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               343-552
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 173
               

               Conread position:
               362-552
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               101, 148
               

               Conread position:
               367-552
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               96, 143
               

               Conread position:
               368-552
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               387-552
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               76, 45
               
Show alignments to all cow chromosomes.