Cow genome map
Conread name: | Liv1-LVRM1D010191 |
Conread position: | 1-221 |
Cow position: | chr5:29766550-29766784 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 182 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 35, 114 |
Conread position: | 1-257 |
Cow position: | chr5:39246146-39245889 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 190 |
Conread position: | 1-272 |
Cow position: | chr5:27056014-27055738 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 269 |
Conread position: | 1-459 |
Cow position: | chr5:28012320-28012803 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 171 |
Conread position: | 1-542 |
Cow position: | chr5:307662-307110 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 549 |
Conread position: | 1-543 |
Cow position: | chr5:46629520-46628971 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 428 |
Conread position: | 1-544 |
Cow position: | chr5:41554669-41554117 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 156 |
Conread position: | 1-552 |
Cow position: | chr5:41528108-41527567 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 149 |
Conread position: | 1-552 |
Cow position: | chr5:41961059-41960520 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 443 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 68 |
Conread position: | 1-552 |
Cow position: | chr5:45700980-45701540 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 451 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 58 |
Conread position: | 1-552 |
Cow position: | chr5:46668616-46669160 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 20 |
Conread position: | 1-552 |
Cow position: | chr5:54791966-54791406 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 139 |
Conread position: | 3-230 |
Cow position: | chr5:32308726-32308497 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 171 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 41, 180 |
Conread position: | 3-236 |
Cow position: | chr5:59639448-59639677 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 176 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 63, 73 |
Conread position: | 3-288 |
Cow position: | chr5:54861393-54861121 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 138 |
Conread position: | 3-306 |
Cow position: | chr5:48532696-48532992 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 217 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 19, 152 |
Conread position: | 3-308 |
Cow position: | chr5:52434219-52434520 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 86 |
Conread position: | 3-322 |
Cow position: | chr5:27002678-27002992 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 40 |
Conread position: | 3-323 |
Cow position: | chr5:28241720-28242040 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 190 |
Conread position: | 3-360 |
Cow position: | chr5:9419403-9419045 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 133 |
Conread position: | 3-391 |
Cow position: | chr5:13046119-13046520 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 40 |
Conread position: | 3-480 |
Cow position: | chr5:49757996-49757523 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 99 |
Conread position: | 3-491 |
Cow position: | chr5:58152099-58151621 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 33 |
Conread position: | 3-531 |
Cow position: | chr5:53625242-53624718 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 26 |
Conread position: | 3-552 |
Cow position: | chr5:3965118-3965669 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 3-552 |
Cow position: | chr5:4018533-4017972 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 183 |
Conread position: | 3-552 |
Cow position: | chr5:10842711-10842155 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 191 |
Conread position: | 3-552 |
Cow position: | chr5:14784699-14784143 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 78 |
Conread position: | 3-552 |
Cow position: | chr5:18664459-18665001 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 195 |
Conread position: | 3-552 |
Cow position: | chr5:23959648-23959103 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 114 |
Conread position: | 3-552 |
Cow position: | chr5:32773442-32773991 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 189 |
Conread position: | 3-552 |
Cow position: | chr5:47830404-47829851 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 188 |
Conread position: | 4-483 |
Cow position: | chr5:41465742-41466231 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 189 |
Conread position: | 5-552 |
Cow position: | chr5:6154230-6153673 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 73 |
Conread position: | 6-489 |
Cow position: | chr5:52613276-52612795 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 327 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 38, 96 |
Conread position: | 6-535 |
Cow position: | chr5:10919497-10920028 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 165 |
Conread position: | 6-551 |
Cow position: | chr5:47893868-47893319 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 158 |
Conread position: | 6-552 |
Cow position: | chr5:1341361-1340804 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 115 |
Conread position: | 6-552 |
Cow position: | chr5:2915120-2915668 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 427 |
Conread position: | 6-552 |
Cow position: | chr5:3503447-3502882 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 317 |
Conread position: | 6-552 |
Cow position: | chr5:3786590-3787154 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 320 |
Conread position: | 6-552 |
Cow position: | chr5:4069891-4070447 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 40 |
Conread position: | 6-552 |
Cow position: | chr5:4385913-4386463 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 126 |
Conread position: | 6-552 |
Cow position: | chr5:12643055-12642523 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 121 |
Conread position: | 6-552 |
Cow position: | chr5:30580000-30580570 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 355 |
Conread position: | 6-552 |
Cow position: | chr5:34697274-34697827 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 291 |
Conread position: | 6-552 |
Cow position: | chr5:37733018-37733575 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 112 |
Conread position: | 6-552 |
Cow position: | chr5:46737903-46737363 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 413 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 107 |
Conread position: | 6-552 |
Cow position: | chr5:48808068-48807507 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 185 |
Conread position: | 6-552 |
Cow position: | chr5:49519231-49519782 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 190 |
Conread position: | 6-552 |
Cow position: | chr5:55628662-55629220 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 190 |
Conread position: | 6-552 |
Cow position: | chr5:57481868-57481314 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 190 |
Conread position: | 6-552 |
Cow position: | chr5:59282990-59283542 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 79 |
Conread position: | 6-552 |
Cow position: | chr5:64781345-64780789 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 190 |
Conread position: | 6-552 |
Cow position: | chr5:73488886-73488334 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 429 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 87 |
Conread position: | 9-552 |
Cow position: | chr5:24099343-24099887 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 184 |
Conread position: | 10-552 |
Cow position: | chr5:46005178-46004631 (view UCSC Genome Browser custom track) |
Alignm length: | 558 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 54 |
Conread position: | 21-552 |
Cow position: | chr5:31100738-31100202 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 135 |
Conread position: | 39-552 |
Cow position: | chr5:10856109-10855591 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 154 |
Conread position: | 39-552 |
Cow position: | chr5:14344711-14344212 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 94 |
Conread position: | 39-552 |
Cow position: | chr5:18885819-18885310 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 65 |
Conread position: | 39-552 |
Cow position: | chr5:46645667-46646180 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 15 |
Conread position: | 82-391 |
Cow position: | chr5:24999236-24998926 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 106 |
Conread position: | 87-552 |
Cow position: | chr5:51309100-51308626 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 77 |
Conread position: | 103-371 |
Cow position: | chr5:27654586-27654850 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 85 |
Conread position: | 104-552 |
Cow position: | chr5:12731939-12731488 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 85 |
Conread position: | 107-552 |
Cow position: | chr5:7274625-7275066 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 87 |
Conread position: | 111-552 |
Cow position: | chr5:24151564-24152000 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 48 |
Conread position: | 114-552 |
Cow position: | chr5:23687109-23686673 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 28 |
Conread position: | 150-544 |
Cow position: | chr5:26183661-26184057 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 22 |
Conread position: | 155-512 |
Cow position: | chr5:48855038-48855397 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 255 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 116, 136 |
Conread position: | 169-322 |
Cow position: | chr5:32282130-32281975 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 127 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 177-552 |
Cow position: | chr5:46777249-46777619 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 68 |
Conread position: | 180-512 |
Cow position: | chr5:27197168-27197498 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 19 |
Conread position: | 203-552 |
Cow position: | chr5:29766999-29767349 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 98 |
Conread position: | 205-531 |
Cow position: | chr5:29434840-29434515 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 238 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 51, 10 |
Conread position: | 210-551 |
Cow position: | chr5:18560526-18560181 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 84 |
Conread position: | 243-552 |
Cow position: | chr5:7143137-7142838 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 204 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 79, 19 |
Conread position: | 258-545 |
Cow position: | chr5:41376976-41376690 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 206 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 18, 40 |
Conread position: | 259-552 |
Cow position: | chr5:40923713-40923420 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 184 |
Conread position: | 270-537 |
Cow position: | chr5:54860984-54860710 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 205 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 49, 260 |
Conread position: | 278-462 |
Cow position: | chr5:44488-44299 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 301-552 |
Cow position: | chr5:10813782-10813524 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 192 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 308-552 |
Cow position: | chr5:27003211-27003463 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 191 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 61, 128 |
Conread position: | 315-552 |
Cow position: | chr5:32281783-32281542 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 129 |
Conread position: | 343-552 |
Cow position: | chr5:61081203-61080990 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 172 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 173 |
Conread position: | 362-552 |
Cow position: | chr5:11115716-11115527 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 136 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 101, 148 |
Conread position: | 367-552 |
Cow position: | chr5:55653805-55653619 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 141 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 96, 143 |
Conread position: | 368-552 |
Cow position: | chr5:52434779-52434967 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 156 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 387-552 |
Cow position: | chr5:53945903-53946065 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 129 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 76, 45 |
Show alignments to all cow chromosomes.