Cow genome map


           Conread name:
           Liv1-LVRM1D010191
        

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 195
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 89
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 291
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 193
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               2-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 236
               

               Conread position:
               2-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 324
               

               Conread position:
               2-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 197
               

               Conread position:
               3-200
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 215
               

               Conread position:
               3-345
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               3-371
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 196
               

               Conread position:
               3-423
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               3-435
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 151
               

               Conread position:
               3-508
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 351
               

               Conread position:
               3-550
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 5
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 188
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 102
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 114
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 307
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 179
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 203
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 205
               

               Conread position:
               5-338
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 191
               

               Conread position:
               6-319
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               6-451
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 15
               

               Conread position:
               6-527
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 264
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 402
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 167
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 194
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 110
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 518
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 156
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 187
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 221
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 163
               

               Conread position:
               7-451
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 97
               

               Conread position:
               9-538
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               343
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               186, 22
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               10-342
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 186
               

               Conread position:
               10-464
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 28
               

               Conread position:
               10-552
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 436
               

               Conread position:
               10-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 171
               

               Conread position:
               10-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 506
               

               Conread position:
               11-298
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 119
               

               Conread position:
               12-552
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 184
               

               Conread position:
               13-552
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 69
               

               Conread position:
               30-516
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               323
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               123, 75
               

               Conread position:
               39-489
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 8
               

               Conread position:
               39-541
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 99
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 349
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 132
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 232
               

               Conread position:
               40-552
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 261
               

               Conread position:
               49-552
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 141
               

               Conread position:
               82-516
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 111
               

               Conread position:
               83-552
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 106
               

               Conread position:
               111-552
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               129-527
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 59
               

               Conread position:
               159-552
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               159-552
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 33
               

               Conread position:
               163-536
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 138
               

               Conread position:
               166-552
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 97
               

               Conread position:
               168-552
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 21
               

               Conread position:
               184-538
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               202-552
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 35
               

               Conread position:
               265-552
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               280-496
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               321-552
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 113
               

               Conread position:
               321-552
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               36, 113
               

               Conread position:
               368-552
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               428-552
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               91, 16
               
Show alignments to all cow chromosomes.