Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-263 |
| Cow position: | chr6:6475061-6474792 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-367 |
| Cow position: | chr6:38271695-38272056 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 195 |
| Conread position: | 1-551 |
| Cow position: | chr6:10644548-10645087 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 89 |
| Conread position: | 1-552 |
| Cow position: | chr6:13316667-13316102 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 291 |
| Conread position: | 1-552 |
| Cow position: | chr6:18973602-18973049 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 193 |
| Conread position: | 1-552 |
| Cow position: | chr6:28105054-28104497 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 2-552 |
| Cow position: | chr6:28133737-28134273 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 236 |
| Conread position: | 2-552 |
| Cow position: | chr6:58601287-58601845 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 324 |
| Conread position: | 2-552 |
| Cow position: | chr6:66193713-66193162 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 197 |
| Conread position: | 3-200 |
| Cow position: | chr6:6157353-6157548 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 3-256 |
| Cow position: | chr6:59918267-59918006 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 215 |
| Conread position: | 3-345 |
| Cow position: | chr6:65928773-65929116 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 3-371 |
| Cow position: | chr6:68027730-68028094 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 196 |
| Conread position: | 3-423 |
| Cow position: | chr6:43999870-44000297 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 3-435 |
| Cow position: | chr6:4258938-4258516 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 3-508 |
| Cow position: | chr6:13310552-13310035 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 351 |
| Conread position: | 3-550 |
| Cow position: | chr6:15477971-15478542 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 5 |
| Conread position: | 3-552 |
| Cow position: | chr6:7178486-7177924 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 3-552 |
| Cow position: | chr6:12665511-12664956 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 3-552 |
| Cow position: | chr6:28490760-28490202 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 102 |
| Conread position: | 3-552 |
| Cow position: | chr6:40275896-40276447 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 3-552 |
| Cow position: | chr6:43618524-43619087 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 307 |
| Conread position: | 3-552 |
| Cow position: | chr6:44149748-44149184 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 3-552 |
| Cow position: | chr6:58065538-58066095 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 203 |
| Conread position: | 3-552 |
| Cow position: | chr6:66232622-66233170 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 205 |
| Conread position: | 5-338 |
| Cow position: | chr6:11724299-11723973 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 5-552 |
| Cow position: | chr6:34891314-34890759 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 191 |
| Conread position: | 6-319 |
| Cow position: | chr6:65882023-65882338 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 6-451 |
| Cow position: | chr6:8021697-8022150 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 15 |
| Conread position: | 6-527 |
| Cow position: | chr6:27529193-27528659 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 264 |
| Conread position: | 6-552 |
| Cow position: | chr6:703028-703577 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 6-552 |
| Cow position: | chr6:914442-914999 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 6-552 |
| Cow position: | chr6:3276563-3276004 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 402 |
| Conread position: | 6-552 |
| Cow position: | chr6:3487612-3487061 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 167 |
| Conread position: | 6-552 |
| Cow position: | chr6:5948966-5948416 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr6:15140370-15139810 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 194 |
| Conread position: | 6-552 |
| Cow position: | chr6:15279000-15278452 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr6:20560295-20559737 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 154 |
| Conread position: | 6-552 |
| Cow position: | chr6:27471413-27471939 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 110 |
| Conread position: | 6-552 |
| Cow position: | chr6:30274080-30273530 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 6-552 |
| Cow position: | chr6:35875905-35875341 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 518 |
| Conread position: | 6-552 |
| Cow position: | chr6:39334058-39333510 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr6:40553762-40553218 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 156 |
| Conread position: | 6-552 |
| Cow position: | chr6:40866506-40865957 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 6-552 |
| Cow position: | chr6:41190133-41190662 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 187 |
| Conread position: | 6-552 |
| Cow position: | chr6:51086754-51087306 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 6-552 |
| Cow position: | chr6:51715351-51715896 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 221 |
| Conread position: | 6-552 |
| Cow position: | chr6:52693828-52694390 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 6-552 |
| Cow position: | chr6:65842436-65842979 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 163 |
| Conread position: | 7-451 |
| Cow position: | chr6:34443724-34444185 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 9-538 |
| Cow position: | chr6:69143445-69143972 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 343 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 186, 22 |
| Conread position: | 9-552 |
| Cow position: | chr6:51730912-51731448 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 22 |
| Conread position: | 10-342 |
| Cow position: | chr6:39438580-39438915 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 186 |
| Conread position: | 10-464 |
| Cow position: | chr6:50634761-50635232 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 10-552 |
| Cow position: | chr6:21973472-21974034 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 436 |
| Conread position: | 10-552 |
| Cow position: | chr6:25215037-25215581 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 171 |
| Conread position: | 10-552 |
| Cow position: | chr6:58027491-58028036 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 506 |
| Conread position: | 11-298 |
| Cow position: | chr6:1099341-1099058 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 119 |
| Conread position: | 12-552 |
| Cow position: | chr6:28169721-28170268 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 184 |
| Conread position: | 13-552 |
| Cow position: | chr6:3888677-3888149 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 30-516 |
| Cow position: | chr6:15920690-15921182 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 323 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 39-489 |
| Cow position: | chr6:36527148-36527608 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 8 |
| Conread position: | 39-541 |
| Cow position: | chr6:184936-184423 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 99 |
| Conread position: | 39-552 |
| Cow position: | chr6:17046899-17047425 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 349 |
| Conread position: | 39-552 |
| Cow position: | chr6:21836346-21835820 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 132 |
| Conread position: | 39-552 |
| Cow position: | chr6:44262644-44262110 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 232 |
| Conread position: | 40-552 |
| Cow position: | chr6:11274065-11273544 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 261 |
| Conread position: | 49-552 |
| Cow position: | chr6:55542408-55541892 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 82-516 |
| Cow position: | chr6:28275898-28276334 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 111 |
| Conread position: | 83-552 |
| Cow position: | chr6:50717-50240 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 106 |
| Conread position: | 111-552 |
| Cow position: | chr6:10250680-10250241 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 129-527 |
| Cow position: | chr6:10609823-10610209 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 59 |
| Conread position: | 159-552 |
| Cow position: | chr6:3784734-3785134 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 159-552 |
| Cow position: | chr6:28187850-28187456 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 163-536 |
| Cow position: | chr6:41349-40973 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 166-552 |
| Cow position: | chr6:7140358-7139977 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 97 |
| Conread position: | 168-552 |
| Cow position: | chr6:64717006-64717389 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 184-538 |
| Cow position: | chr6:10339629-10339276 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 202-552 |
| Cow position: | chr6:40379623-40379267 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 35 |
| Conread position: | 265-552 |
| Cow position: | chr6:46603174-46602879 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 280-496 |
| Cow position: | chr6:32301158-32300937 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 321-552 |
| Cow position: | chr6:66745125-66745357 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 321-552 |
| Cow position: | chr6:67265016-67265248 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 368-552 |
| Cow position: | chr6:28766862-28766676 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 428-552 |
| Cow position: | chr6:47625301-47625426 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 16 |
Show alignments to all cow chromosomes.