Cow genome map


           Conread name:
           Liv1-LVRM1D010191
        

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 33
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 104
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 74
               

               Conread position:
               1-550
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 176
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 443
               

               Conread position:
               1-551
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 174
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 326
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 193
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 191
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 183
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 389
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 506
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 246
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 6
               

               Conread position:
               2-284
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               3-527
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               3-539
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 5
               

               Conread position:
               3-542
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 143
               

               Conread position:
               3-545
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 251
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 278
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 189
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 192
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 188
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 207
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 192
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               366
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 23
               

               Conread position:
               3-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 178
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 442
               

               Conread position:
               6-256
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 183
               

               Conread position:
               6-322
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 187
               

               Conread position:
               6-341
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 305
               

               Conread position:
               6-368
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 500
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 183
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 186
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 135
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 187
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 190
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 178
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 219
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               6-552
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 149
               

               Conread position:
               9-517
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 148
               

               Conread position:
               9-541
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               9-543
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 66
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 183
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 175
               

               Conread position:
               9-552
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 477
               

               Conread position:
               20-334
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 15
               

               Conread position:
               25-552
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 214
               

               Conread position:
               30-552
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 184
               

               Conread position:
               36-330
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 29
               

               Conread position:
               39-552
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               43-293
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               47-306
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               30, 26
               

               Conread position:
               47-552
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 50
               

               Conread position:
               55-552
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 137
               

               Conread position:
               65-552
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 129
               

               Conread position:
               86-470
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               185, 28
               

               Conread position:
               89-552
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 106
               

               Conread position:
               147-298
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               35, 105
               

               Conread position:
               156-552
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               179, 21
               

               Conread position:
               161-552
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 101
               

               Conread position:
               181-552
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               192-552
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 135
               

               Conread position:
               216-552
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               255-552
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               282-552
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 116
               

               Conread position:
               306-542
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               65, 163
               

               Conread position:
               307-552
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               310-520
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               60, 5
               

               Conread position:
               315-552
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               321-542
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               38, 124
               

               Conread position:
               328-552
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               332-552
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               137, 18
               

               Conread position:
               340-552
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 179
               

               Conread position:
               341-552
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 57
               

               Conread position:
               376-552
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               154, 64
               

               Conread position:
               399-552
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               400-552
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               414-552
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.