Cow genome map

Conread name: Liv1-LVRM1D010191

Conread position: 1-297
Cow position: chr7:63555855-63556140 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 61

Conread position: 1-319
Cow position: chr7:27787532-27787848 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 33

Conread position: 1-365
Cow position: chr7:20785078-20784714 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 104

Conread position: 1-391
Cow position: chr7:54671184-54670757 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 74

Conread position: 1-550
Cow position: chr7:19989924-19990470 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 176

Conread position: 1-551
Cow position: chr7:29471356-29471927 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 102

Conread position: 1-551
Cow position: chr7:42871038-42871599 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 443

Conread position: 1-551
Cow position: chr7:51015162-51015712 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 174

Conread position: 1-552
Cow position: chr7:1609748-1609182 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 326

Conread position: 1-552
Cow position: chr7:3156365-3156926 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 193

Conread position: 1-552
Cow position: chr7:20798545-20797992 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 191

Conread position: 1-552
Cow position: chr7:33332457-33333015 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 1-552
Cow position: chr7:48635325-48635875 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 389

Conread position: 1-552
Cow position: chr7:59679745-59680303 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 506

Conread position: 1-552
Cow position: chr7:67429468-67430023 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 246

Conread position: 1-552
Cow position: chr7:67675995-67676534 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 6

Conread position: 2-284
Cow position: chr7:995414-995701 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 143

Conread position: 3-527
Cow position: chr7:59138557-59139062 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 3-539
Cow position: chr7:25251050-25251583 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 5

Conread position: 3-542
Cow position: chr7:27583819-27583282 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 143

Conread position: 3-545
Cow position: chr7:24058340-24058886 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 251

Conread position: 3-552
Cow position: chr7:545742-546301 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 278

Conread position: 3-552
Cow position: chr7:14214468-14213913 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chr7:20514877-20514332 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr7:20774433-20773879 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 188

Conread position: 3-552
Cow position: chr7:25440402-25440958 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 207

Conread position: 3-552
Cow position: chr7:33312051-33311489 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr7:63386626-63387202 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 154

Conread position: 3-552
Cow position: chr7:67489610-67490147 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 366
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 23

Conread position: 3-552
Cow position: chr7:68333845-68334375 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 178

Conread position: 5-552
Cow position: chr7:57564196-57563646 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 442

Conread position: 6-256
Cow position: chr7:33405338-33405089 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 183

Conread position: 6-322
Cow position: chr7:8144331-8144013 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 187

Conread position: 6-341
Cow position: chr7:34150209-34150543 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 305

Conread position: 6-368
Cow position: chr7:39792672-39793036 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr7:1371744-1371191 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 500

Conread position: 6-552
Cow position: chr7:1452545-1453100 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 6-552
Cow position: chr7:10430521-10429973 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr7:13532998-13532459 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 183

Conread position: 6-552
Cow position: chr7:14138694-14138140 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr7:21126760-21126213 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 190

Conread position: 6-552
Cow position: chr7:21234108-21233550 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 135

Conread position: 6-552
Cow position: chr7:21986331-21986858 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 187

Conread position: 6-552
Cow position: chr7:24807553-24807028 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 6-552
Cow position: chr7:34486818-34487367 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr7:38397717-38398273 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 178

Conread position: 6-552
Cow position: chr7:45948239-45947694 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 219

Conread position: 6-552
Cow position: chr7:55537019-55536473 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 14

Conread position: 6-552
Cow position: chr7:67799728-67800281 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 149

Conread position: 9-517
Cow position: chr7:58994498-58995004 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 148

Conread position: 9-541
Cow position: chr7:27606423-27605875 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 9-543
Cow position: chr7:46901169-46900622 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 66

Conread position: 9-552
Cow position: chr7:5309208-5308658 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 183

Conread position: 9-552
Cow position: chr7:64240098-64239538 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 175

Conread position: 9-552
Cow position: chr7:66905628-66906181 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 477

Conread position: 20-334
Cow position: chr7:39097586-39097279 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 15

Conread position: 25-552
Cow position: chr7:5663470-5664022 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 214

Conread position: 30-552
Cow position: chr7:41875352-41874822 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 184

Conread position: 36-330
Cow position: chr7:68481481-68481774 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 29

Conread position: 39-552
Cow position: chr7:20532903-20533403 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 43-293
Cow position: chr7:49829684-49829428 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 47-306
Cow position: chr7:19975716-19975464 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 30, 26

Conread position: 47-552
Cow position: chr7:24878927-24878428 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 50

Conread position: 55-552
Cow position: chr7:6630347-6629845 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 137

Conread position: 65-552
Cow position: chr7:5261961-5261462 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 129

Conread position: 86-470
Cow position: chr7:54786397-54786021 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 185, 28

Conread position: 89-552
Cow position: chr7:40268981-40268523 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 147-298
Cow position: chr7:24934477-24934324 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 105

Conread position: 156-552
Cow position: chr7:6554-6938 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 179, 21

Conread position: 161-552
Cow position: chr7:57211223-57211607 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 101

Conread position: 181-552
Cow position: chr7:21311531-21311905 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 192-552
Cow position: chr7:66036264-66036626 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 135

Conread position: 216-552
Cow position: chr7:68439174-68439507 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 153, 55

Conread position: 255-552
Cow position: chr7:54649049-54649354 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 282-552
Cow position: chr7:995938-996200 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 116

Conread position: 306-542
Cow position: chr7:64350690-64350937 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 163

Conread position: 307-552
Cow position: chr7:55041284-55041032 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 310-520
Cow position: chr7:3124676-3124892 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 60, 5

Conread position: 315-552
Cow position: chr7:445049-444805 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 22

Conread position: 321-542
Cow position: chr7:27788170-27788391 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 38, 124

Conread position: 328-552
Cow position: chr7:48805214-48804983 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 0

Conread position: 332-552
Cow position: chr7:24934312-24934099 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 137, 18

Conread position: 340-552
Cow position: chr7:8143747-8143522 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 179

Conread position: 341-552
Cow position: chr7:40320432-40320635 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 57

Conread position: 376-552
Cow position: chr7:59685091-59685265 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 154, 64

Conread position: 399-552
Cow position: chr7:39793169-39793322 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 41

Conread position: 400-552
Cow position: chr7:49730502-49730658 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 414-552
Cow position: chr7:34417164-34417024 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.