Cow genome map

Conread name: Liv1-LVRM1D010191

Conread position: 1-264
Cow position: chr8:45450389-45450652 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 196

Conread position: 1-295
Cow position: chr8:59141408-59141706 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 226

Conread position: 1-318
Cow position: chr8:8315376-8315054 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-324
Cow position: chr8:28878019-28877691 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 222

Conread position: 1-463
Cow position: chr8:11969198-11968730 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 260

Conread position: 1-472
Cow position: chr8:19865339-19865796 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 310
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 296, 180

Conread position: 1-512
Cow position: chr8:25408815-25409331 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 192

Conread position: 1-552
Cow position: chr8:76499-75944 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 369
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 78

Conread position: 1-552
Cow position: chr8:21789949-21790488 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 346
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 15

Conread position: 1-552
Cow position: chr8:38606117-38605572 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 1-552
Cow position: chr8:42158902-42158364 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 195

Conread position: 1-552
Cow position: chr8:42485001-42485555 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 189

Conread position: 1-552
Cow position: chr8:49859677-49859127 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 1-552
Cow position: chr8:50960512-50959969 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 1-552
Cow position: chr8:58185493-58184953 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 128

Conread position: 1-552
Cow position: chr8:59261834-59261299 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 2-552
Cow position: chr8:39809402-39808857 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 355
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 255, 172

Conread position: 3-360
Cow position: chr8:11564624-11564974 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 35, 15

Conread position: 3-542
Cow position: chr8:30487295-30486746 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 18

Conread position: 3-550
Cow position: chr8:22571223-22570666 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 175

Conread position: 3-551
Cow position: chr8:56883587-56884171 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 544

Conread position: 3-552
Cow position: chr8:5681966-5681422 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 99

Conread position: 3-552
Cow position: chr8:8517501-8516956 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 149

Conread position: 3-552
Cow position: chr8:11763026-11763589 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 190

Conread position: 3-552
Cow position: chr8:21157704-21157150 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 285

Conread position: 3-552
Cow position: chr8:32436996-32436442 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 192

Conread position: 3-552
Cow position: chr8:32630941-32630392 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 3-552
Cow position: chr8:42419353-42418796 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 312

Conread position: 3-552
Cow position: chr8:42468750-42469308 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 5

Conread position: 3-552
Cow position: chr8:45691935-45691370 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 268

Conread position: 3-552
Cow position: chr8:47068726-47068166 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 373

Conread position: 4-289
Cow position: chr8:48787516-48787800 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 34, 114

Conread position: 4-552
Cow position: chr8:10749452-10749995 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 58

Conread position: 4-552
Cow position: chr8:42579491-42578944 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 6-516
Cow position: chr8:19330802-19331316 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-537
Cow position: chr8:17312113-17312660 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 450

Conread position: 6-551
Cow position: chr8:3855925-3855385 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 15

Conread position: 6-552
Cow position: chr8:4687492-4688042 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr8:5017269-5017827 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr8:7161987-7162538 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 187

Conread position: 6-552
Cow position: chr8:8401025-8400472 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 6-552
Cow position: chr8:8911597-8912124 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 43

Conread position: 6-552
Cow position: chr8:10742580-10742007 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr8:11802912-11803463 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 178

Conread position: 6-552
Cow position: chr8:12450108-12450684 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 389

Conread position: 6-552
Cow position: chr8:14590812-14590238 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 186

Conread position: 6-552
Cow position: chr8:23771727-23772286 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 110

Conread position: 6-552
Cow position: chr8:24915246-24914679 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 6-552
Cow position: chr8:25523495-25524040 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 108

Conread position: 6-552
Cow position: chr8:25775585-25775020 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 6-552
Cow position: chr8:29007732-29008271 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 175

Conread position: 6-552
Cow position: chr8:36635409-36634869 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 23

Conread position: 6-552
Cow position: chr8:39195125-39194573 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 6-552
Cow position: chr8:41644581-41644044 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 6-552
Cow position: chr8:42656880-42656345 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 79

Conread position: 6-552
Cow position: chr8:46051277-46051825 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 123

Conread position: 6-552
Cow position: chr8:47661230-47660681 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 196

Conread position: 6-552
Cow position: chr8:50930040-50929474 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 447

Conread position: 6-552
Cow position: chr8:60061473-60062037 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 190

Conread position: 7-552
Cow position: chr8:47783705-47783175 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 362
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 122

Conread position: 8-416
Cow position: chr8:25437410-25437831 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 9-273
Cow position: chr8:44243488-44243225 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 137

Conread position: 9-391
Cow position: chr8:11832802-11833214 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 269

Conread position: 9-434
Cow position: chr8:50287832-50287404 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 261

Conread position: 9-549
Cow position: chr8:12801506-12802051 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 132

Conread position: 9-552
Cow position: chr8:25377075-25377619 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 102

Conread position: 9-552
Cow position: chr8:32318459-32317902 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 187

Conread position: 9-552
Cow position: chr8:50994866-50995427 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 135

Conread position: 21-479
Cow position: chr8:35212989-35213430 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 23-552
Cow position: chr8:14631557-14631023 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 11

Conread position: 25-523
Cow position: chr8:11524847-11525324 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 331
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 33

Conread position: 33-525
Cow position: chr8:44662577-44662093 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 34-390
Cow position: chr8:41944831-41945176 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 246

Conread position: 39-552
Cow position: chr8:1348140-1347610 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 235

Conread position: 43-313
Cow position: chr8:45449908-45450171 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 43-552
Cow position: chr8:47673979-47674486 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 150

Conread position: 82-552
Cow position: chr8:54017378-54016907 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 48

Conread position: 84-552
Cow position: chr8:38391811-38392268 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 109

Conread position: 87-549
Cow position: chr8:4305221-4305689 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 289

Conread position: 100-551
Cow position: chr8:32522159-32522610 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 280
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 269, 160

Conread position: 117-324
Cow position: chr8:56039745-56039955 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 120-552
Cow position: chr8:47075352-47075802 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 206

Conread position: 150-552
Cow position: chr8:19051684-19052092 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 11

Conread position: 155-523
Cow position: chr8:49215973-49216339 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 38

Conread position: 155-552
Cow position: chr8:53427738-53428127 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 33

Conread position: 158-545
Cow position: chr8:15409032-15409427 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 80, 21

Conread position: 158-552
Cow position: chr8:41740005-41740394 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 82

Conread position: 163-552
Cow position: chr8:31984378-31984777 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 30

Conread position: 194-550
Cow position: chr8:30496279-30495938 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 76, 7

Conread position: 198-552
Cow position: chr8:23135328-23134969 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 99

Conread position: 216-441
Cow position: chr8:32503888-32503656 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 137

Conread position: 251-545
Cow position: chr8:44108039-44108350 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 215

Conread position: 254-430
Cow position: chr8:44699534-44699719 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 270-550
Cow position: chr8:37656204-37655917 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 97, 0

Conread position: 303-552
Cow position: chr8:49697600-49697348 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 61, 25

Conread position: 308-552
Cow position: chr8:28878407-28878655 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 129

Conread position: 328-552
Cow position: chr8:21204997-21205215 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 23

Conread position: 332-552
Cow position: chr8:31251919-31252135 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 66

Conread position: 332-552
Cow position: chr8:40892053-40891839 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 19

Conread position: 434-552
Cow position: chr8:41945413-41945533 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.