Cow genome map
| Conread name: | Liv1-LVRM1D010191 |
| Conread position: | 1-203 |
| Cow position: | chr9:64119959-64120156 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 82 |
| Conread position: | 1-424 |
| Cow position: | chr9:22432011-22432435 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 228 |
| Conread position: | 1-551 |
| Cow position: | chr9:1981008-1981559 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 197 |
| Conread position: | 1-552 |
| Cow position: | chr9:651278-650732 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 205 |
| Conread position: | 1-552 |
| Cow position: | chr9:828399-827812 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 198 |
| Conread position: | 1-552 |
| Cow position: | chr9:25187845-25188390 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 42 |
| Conread position: | 2-483 |
| Cow position: | chr9:43664539-43664986 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 41 |
| Conread position: | 3-319 |
| Cow position: | chr9:2210031-2210367 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 3-411 |
| Cow position: | chr9:45874072-45874491 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 350 |
| Conread position: | 3-476 |
| Cow position: | chr9:3804282-3804767 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 266 |
| Conread position: | 3-478 |
| Cow position: | chr9:48808593-48808137 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 258, 39 |
| Conread position: | 3-521 |
| Cow position: | chr9:8166144-8165614 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 3-522 |
| Cow position: | chr9:28655087-28655613 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 196 |
| Conread position: | 3-552 |
| Cow position: | chr9:2211874-2212433 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 152 |
| Conread position: | 3-552 |
| Cow position: | chr9:3005513-3004951 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 323 |
| Conread position: | 3-552 |
| Cow position: | chr9:17063651-17063091 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 327 |
| Conread position: | 3-552 |
| Cow position: | chr9:28678708-28679268 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 178 |
| Conread position: | 3-552 |
| Cow position: | chr9:31065456-31066011 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 114 |
| Conread position: | 3-552 |
| Cow position: | chr9:50791450-50792006 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 192 |
| Conread position: | 5-551 |
| Cow position: | chr9:13475046-13474481 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 5-552 |
| Cow position: | chr9:4533234-4533786 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 136 |
| Conread position: | 5-552 |
| Cow position: | chr9:44818899-44819437 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 41 |
| Conread position: | 5-552 |
| Cow position: | chr9:59482053-59481504 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 140 |
| Conread position: | 6-148 |
| Cow position: | chr9:6829574-6829432 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-295 |
| Cow position: | chr9:26102350-26102071 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 184 |
| Conread position: | 6-551 |
| Cow position: | chr9:18509072-18508531 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 180 |
| Conread position: | 6-552 |
| Cow position: | chr9:5004715-5005278 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 187 |
| Conread position: | 6-552 |
| Cow position: | chr9:6250041-6250594 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 78 |
| Conread position: | 6-552 |
| Cow position: | chr9:10322545-10323097 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 118 |
| Conread position: | 6-552 |
| Cow position: | chr9:10937337-10937888 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 425 |
| Conread position: | 6-552 |
| Cow position: | chr9:17305236-17304682 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 6-552 |
| Cow position: | chr9:21410034-21410594 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 514 |
| Conread position: | 6-552 |
| Cow position: | chr9:22654313-22654872 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 513 |
| Conread position: | 6-552 |
| Cow position: | chr9:28022545-28023096 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 123 |
| Conread position: | 6-552 |
| Cow position: | chr9:29628009-29627458 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 195 |
| Conread position: | 6-552 |
| Cow position: | chr9:30673107-30673673 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 6-552 |
| Cow position: | chr9:32969691-32970237 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 187 |
| Conread position: | 6-552 |
| Cow position: | chr9:37162072-37161517 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 6-552 |
| Cow position: | chr9:42310424-42310971 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 175 |
| Conread position: | 6-552 |
| Cow position: | chr9:59536837-59537391 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 188 |
| Conread position: | 6-552 |
| Cow position: | chr9:60277274-60276723 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 184 |
| Conread position: | 7-380 |
| Cow position: | chr9:5515163-5515535 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 14 |
| Conread position: | 7-540 |
| Cow position: | chr9:25633263-25632738 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 9-550 |
| Cow position: | chr9:7061338-7060785 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 9-552 |
| Cow position: | chr9:29027464-29026914 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 172 |
| Conread position: | 9-552 |
| Cow position: | chr9:51181441-51180886 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 450 |
| Conread position: | 10-552 |
| Cow position: | chr9:31808323-31808877 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 18-527 |
| Cow position: | chr9:221774-221255 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 21-552 |
| Cow position: | chr9:59427793-59428299 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 22 |
| Conread position: | 30-539 |
| Cow position: | chr9:4282742-4283254 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 51 |
| Conread position: | 30-540 |
| Cow position: | chr9:50698071-50698583 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 12 |
| Conread position: | 31-292 |
| Cow position: | chr9:2186636-2186910 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 32-552 |
| Cow position: | chr9:62737023-62736502 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 39-380 |
| Cow position: | chr9:27035459-27035805 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 154 |
| Conread position: | 39-552 |
| Cow position: | chr9:9013871-9014368 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 262 |
| Conread position: | 40-552 |
| Cow position: | chr9:130411-129870 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 447 |
| Conread position: | 60-552 |
| Cow position: | chr9:27782982-27783484 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 456 |
| Conread position: | 86-552 |
| Cow position: | chr9:44384082-44384556 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 94-552 |
| Cow position: | chr9:46042384-46041955 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 26 |
| Conread position: | 114-552 |
| Cow position: | chr9:1995540-1995093 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 401 |
| Conread position: | 145-552 |
| Cow position: | chr9:3372408-3372032 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 295, 54 |
| Conread position: | 157-552 |
| Cow position: | chr9:2871221-2871622 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 145 |
| Conread position: | 159-360 |
| Cow position: | chr9:1637562-1637751 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 160-552 |
| Cow position: | chr9:19158645-19158241 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 289 |
| Conread position: | 216-371 |
| Cow position: | chr9:18211173-18211333 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 220-539 |
| Cow position: | chr9:20308054-20307728 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 227-552 |
| Cow position: | chr9:20939285-20939604 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 37 |
| Conread position: | 231-499 |
| Cow position: | chr9:59447314-59447577 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 161 |
| Conread position: | 251-540 |
| Cow position: | chr9:2053912-2054204 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 116, 51 |
| Conread position: | 258-552 |
| Cow position: | chr9:59447513-59447803 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 286-552 |
| Cow position: | chr9:38677173-38677440 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 13 |
| Conread position: | 292-546 |
| Cow position: | chr9:26736781-26737042 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 222 |
| Conread position: | 332-552 |
| Cow position: | chr9:3224550-3224345 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 332-552 |
| Cow position: | chr9:20176647-20176413 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 370-552 |
| Cow position: | chr9:18211363-18211544 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 136 |
| Conread position: | 384-552 |
| Cow position: | chr9:26567728-26567895 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 79, 104 |
Show alignments to all cow chromosomes.