Cow genome map


           Conread name:
           Lng1-LNG010007H08
        

               Conread position:
               2-267
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               36, 239
               

               Conread position:
               3-132
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-141
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-161
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               128, 25
               

               Conread position:
               3-182
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               124, 164
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               3-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               3-249
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               3-255
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               125, 37
               

               Conread position:
               3-266
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               3-266
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 149
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 148
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 181
               

               Conread position:
               3-276
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               3-279
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               3-279
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 197
               

               Conread position:
               3-282
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 219
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 266
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               114, 23
               

               Conread position:
               3-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               114, 22
               

               Conread position:
               4-205
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               4-224
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               21, 110
               

               Conread position:
               4-283
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               27, 146
               

               Conread position:
               9-275
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 253
               

               Conread position:
               12-198
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               119, 12
               

               Conread position:
               15-252
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 190
               

               Conread position:
               15-267
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               116, 190
               

               Conread position:
               16-283
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               17-244
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               100, 8
               

               Conread position:
               18-283
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               19-205
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               112, 145
               

               Conread position:
               19-224
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               19-249
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               20-198
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               20-249
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 170
               

               Conread position:
               20-266
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               128, 49
               

               Conread position:
               20-268
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               109, 44
               

               Conread position:
               20-279
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               24-252
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               24-276
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               24-283
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 121
               

               Conread position:
               26-141
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               103, 37
               

               Conread position:
               26-248
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 127
               

               Conread position:
               26-249
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               81, 62
               

               Conread position:
               26-276
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               30-249
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               30-253
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               34-266
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 119
               
Show alignments to all cow chromosomes.