Cow genome map
| Conread name: | Lng1-LNG010007H08 |
| Conread position: | 2-170 |
| Cow position: | chr13:28652790-28652959 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 3-155 |
| Cow position: | chr13:17966218-17966064 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 124, 30 |
| Conread position: | 3-156 |
| Cow position: | chr13:8374783-8374626 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 3-243 |
| Cow position: | chr13:43480047-43480290 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 3-246 |
| Cow position: | chr13:24369571-24369817 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 3-252 |
| Cow position: | chr13:17114389-17114142 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 78 |
| Conread position: | 3-257 |
| Cow position: | chr13:55316201-55315945 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 164 |
| Conread position: | 3-262 |
| Cow position: | chr13:37818764-37818511 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 18, 153 |
| Conread position: | 3-268 |
| Cow position: | chr13:20784580-20784842 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 3-276 |
| Cow position: | chr13:10929003-10928728 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 3-276 |
| Cow position: | chr13:22085756-22085495 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 35, 142 |
| Conread position: | 3-279 |
| Cow position: | chr13:15041483-15041207 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 109, 23 |
| Conread position: | 3-279 |
| Cow position: | chr13:20864026-20863756 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 3-282 |
| Cow position: | chr13:20684132-20683855 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 161 |
| Conread position: | 3-283 |
| Cow position: | chr13:15958610-15958890 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 142 |
| Conread position: | 3-283 |
| Cow position: | chr13:41806762-41807044 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 204 |
| Conread position: | 3-295 |
| Cow position: | chr13:54702176-54702471 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 217 |
| Conread position: | 4-267 |
| Cow position: | chr13:23856201-23856466 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 201 |
| Conread position: | 5-280 |
| Cow position: | chr13:3701430-3701699 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 126, 141 |
| Conread position: | 9-249 |
| Cow position: | chr13:23667248-23667497 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 16, 93 |
| Conread position: | 9-276 |
| Cow position: | chr13:9906731-9907001 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 120, 16 |
| Conread position: | 9-279 |
| Cow position: | chr13:25817522-25817778 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 11-283 |
| Cow position: | chr13:31813873-31814136 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 14-282 |
| Cow position: | chr13:17886510-17886765 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 8 |
| Conread position: | 20-266 |
| Cow position: | chr13:29630863-29631104 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 21-148 |
| Cow position: | chr13:20288337-20288466 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 21-272 |
| Cow position: | chr13:53573979-53574216 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 21-283 |
| Cow position: | chr13:55843488-55843753 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 25-266 |
| Cow position: | chr13:4664854-4664609 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 26-266 |
| Cow position: | chr13:9665073-9665327 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 30-252 |
| Cow position: | chr13:8607501-8607281 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 120, 62 |
| Conread position: | 30-264 |
| Cow position: | chr13:35659770-35660003 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 285-853 |
| Cow position: | chr13:15686652-15687219 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 41 |
Show alignments to all cow chromosomes.