Cow genome map
| Conread name: | Lng1-LNG010007H08 |
| Conread position: | 3-121 |
| Cow position: | chr16:9905086-9904970 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 23 |
| Conread position: | 3-163 |
| Cow position: | chr16:25386973-25386817 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 3-245 |
| Cow position: | chr16:33704804-33704552 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 3-252 |
| Cow position: | chr16:44973490-44973243 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 3-264 |
| Cow position: | chr16:4059352-4059094 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 3-265 |
| Cow position: | chr16:37669741-37669994 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 3-266 |
| Cow position: | chr16:48006497-48006757 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 3-282 |
| Cow position: | chr16:18679194-18678914 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 3-283 |
| Cow position: | chr16:13689662-13689379 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 144 |
| Conread position: | 3-283 |
| Cow position: | chr16:40562228-40561942 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-283 |
| Cow position: | chr16:45139667-45139384 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 189 |
| Conread position: | 5-195 |
| Cow position: | chr16:24855537-24855344 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-282 |
| Cow position: | chr16:48398260-48398526 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 10-234 |
| Cow position: | chr16:4875983-4875763 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 140 |
| Conread position: | 17-249 |
| Cow position: | chr16:48493159-48492936 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 19-235 |
| Cow position: | chr16:41608593-41608372 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 20-276 |
| Cow position: | chr16:54579144-54578892 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 106, 44 |
| Conread position: | 21-249 |
| Cow position: | chr16:13969395-13969629 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 77, 14 |
| Conread position: | 24-255 |
| Cow position: | chr16:51069943-51070185 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 161 |
| Conread position: | 24-330 |
| Cow position: | chr16:13068647-13068948 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 100 |
| Conread position: | 25-266 |
| Cow position: | chr16:38708857-38709093 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 124 |
| Conread position: | 26-201 |
| Cow position: | chr16:7785116-7784937 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 28-282 |
| Cow position: | chr16:32970108-32970351 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 121 |
| Conread position: | 30-276 |
| Cow position: | chr16:53627459-53627700 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 119 |
| Conread position: | 33-152 |
| Cow position: | chr16:12320185-12320065 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 31 |
| Conread position: | 33-267 |
| Cow position: | chr16:5363861-5363623 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 33-267 |
| Cow position: | chr16:5636551-5636321 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 33-283 |
| Cow position: | chr16:49141599-49141842 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 112 |
| Conread position: | 34-263 |
| Cow position: | chr16:11102858-11103090 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 34-283 |
| Cow position: | chr16:45609955-45609702 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 35-197 |
| Cow position: | chr16:10352834-10352669 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.