Cow genome map
| Conread name: | Lng1-LNG010007H08 |
| Conread position: | 3-140 |
| Cow position: | chr17:32009404-32009540 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 87 |
| Conread position: | 3-149 |
| Cow position: | chr17:1040781-1040634 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 126, 30 |
| Conread position: | 3-198 |
| Cow position: | chr17:31037341-31037538 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 151 |
| Conread position: | 3-235 |
| Cow position: | chr17:26881295-26881532 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 3-249 |
| Cow position: | chr17:38647097-38646859 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 3-250 |
| Cow position: | chr17:1035561-1035814 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 107, 134 |
| Conread position: | 3-252 |
| Cow position: | chr17:33122128-33121876 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 124, 28 |
| Conread position: | 3-279 |
| Cow position: | chr17:33288621-33288893 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 3-282 |
| Cow position: | chr17:9854020-9853744 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 128, 14 |
| Conread position: | 3-282 |
| Cow position: | chr17:38614996-38614714 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 3-283 |
| Cow position: | chr17:18109048-18109329 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 164 |
| Conread position: | 3-283 |
| Cow position: | chr17:32993587-32993856 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 4-283 |
| Cow position: | chr17:10473869-10473592 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 29, 206 |
| Conread position: | 9-228 |
| Cow position: | chr17:908771-908558 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 9-283 |
| Cow position: | chr17:4601516-4601786 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 53 |
| Conread position: | 10-252 |
| Cow position: | chr17:7810717-7810951 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 119, 9 |
| Conread position: | 10-283 |
| Cow position: | chr17:24973979-24973707 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 11-283 |
| Cow position: | chr17:40331796-40331526 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 11-286 |
| Cow position: | chr17:41399944-41400215 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 23 |
| Conread position: | 15-250 |
| Cow position: | chr17:27429599-27429368 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 17-263 |
| Cow position: | chr17:8926193-8926443 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 77 |
| Conread position: | 19-235 |
| Cow position: | chr17:21207111-21207330 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 20-286 |
| Cow position: | chr17:25755812-25755538 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 21-280 |
| Cow position: | chr17:44146954-44147212 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 24-306 |
| Cow position: | chr17:20234244-20233962 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 94, 157 |
| Conread position: | 25-191 |
| Cow position: | chr17:3467773-3467618 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 39 |
| Conread position: | 26-205 |
| Cow position: | chr17:10510645-10510827 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 28-267 |
| Cow position: | chr17:27819314-27819075 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 99, 76 |
| Conread position: | 30-235 |
| Cow position: | chr17:26000126-25999921 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 114 |
| Conread position: | 30-245 |
| Cow position: | chr17:41892056-41892276 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 101, 83 |
| Conread position: | 30-267 |
| Cow position: | chr17:8279699-8279935 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 30-283 |
| Cow position: | chr17:21680774-21680525 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 101, 63 |
| Conread position: | 32-283 |
| Cow position: | chr17:25541813-25542055 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 33-268 |
| Cow position: | chr17:21017803-21017566 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 72 |
Show alignments to all cow chromosomes.