Cow genome map
| Conread name: | Lng1-LNG010007H08 |
| Conread position: | 2-252 |
| Cow position: | chr2:51406665-51406411 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 106 |
| Conread position: | 3-153 |
| Cow position: | chr2:80865858-80866005 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-170 |
| Cow position: | chr2:30144714-30144552 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 3-181 |
| Cow position: | chr2:19328543-19328365 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 3-198 |
| Cow position: | chr2:1638600-1638400 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 3-222 |
| Cow position: | chr2:38362369-38362594 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 3-229 |
| Cow position: | chr2:46020901-46020676 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 109, 27 |
| Conread position: | 3-232 |
| Cow position: | chr2:68716672-68716901 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 29, 149 |
| Conread position: | 3-249 |
| Cow position: | chr2:38628905-38628659 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 148 |
| Conread position: | 3-252 |
| Cow position: | chr2:1658492-1658247 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 3-252 |
| Cow position: | chr2:21003170-21002935 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 3-267 |
| Cow position: | chr2:79962-80226 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 133 |
| Conread position: | 3-268 |
| Cow position: | chr2:192470-192727 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 112, 85 |
| Conread position: | 3-276 |
| Cow position: | chr2:55877384-55877124 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 3-283 |
| Cow position: | chr2:50278021-50277739 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 109, 85 |
| Conread position: | 3-283 |
| Cow position: | chr2:80324856-80325130 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 3-306 |
| Cow position: | chr2:14089789-14089475 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 3-306 |
| Cow position: | chr2:45912636-45912943 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 142 |
| Conread position: | 3-306 |
| Cow position: | chr2:64212560-64212863 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 245 |
| Conread position: | 3-347 |
| Cow position: | chr2:44170555-44170211 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 4-210 |
| Cow position: | chr2:44051306-44051093 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 4-233 |
| Cow position: | chr2:72183497-72183723 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 4-235 |
| Cow position: | chr2:13604464-13604230 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 4-276 |
| Cow position: | chr2:54654619-54654895 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 4-283 |
| Cow position: | chr2:43994930-43994651 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 11-252 |
| Cow position: | chr2:13684687-13684454 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 11-266 |
| Cow position: | chr2:41248555-41248302 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 120, 147 |
| Conread position: | 11-330 |
| Cow position: | chr2:39855776-39855454 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 12-283 |
| Cow position: | chr2:17185427-17185702 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 14-248 |
| Cow position: | chr2:14555766-14555999 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 117, 12 |
| Conread position: | 14-339 |
| Cow position: | chr2:9173290-9173595 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 20-213 |
| Cow position: | chr2:42936232-42936426 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 85 |
| Conread position: | 23-298 |
| Cow position: | chr2:42599908-42599628 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 210 |
| Conread position: | 24-241 |
| Cow position: | chr2:50400401-50400178 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 24-252 |
| Cow position: | chr2:42309579-42309806 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 25-224 |
| Cow position: | chr2:1651379-1651179 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 25-282 |
| Cow position: | chr2:43773602-43773857 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 78, 181 |
| Conread position: | 26-240 |
| Cow position: | chr2:25597521-25597733 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 113 |
| Conread position: | 26-276 |
| Cow position: | chr2:2589978-2590220 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 105, 123 |
| Conread position: | 28-282 |
| Cow position: | chr2:70579735-70579993 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 232 |
| Conread position: | 29-229 |
| Cow position: | chr2:19597767-19597564 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 29-282 |
| Cow position: | chr2:5297717-5297457 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 30-283 |
| Cow position: | chr2:17341546-17341291 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 139 |
| Conread position: | 30-283 |
| Cow position: | chr2:32115047-32114782 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 33-279 |
| Cow position: | chr2:39597261-39597019 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 57 |
| Conread position: | 33-283 |
| Cow position: | chr2:70704221-70703971 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 186 |
| Conread position: | 37-283 |
| Cow position: | chr2:28820325-28820081 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 94, 114 |
Show alignments to all cow chromosomes.