Cow genome map
| Conread name: | Lng1-LNG010007H08 |
| Conread position: | 3-200 |
| Cow position: | chr3:56612332-56612132 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 185 |
| Conread position: | 3-252 |
| Cow position: | chr3:80564938-80564687 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 36, 180 |
| Conread position: | 3-252 |
| Cow position: | chr3:81277727-81277980 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 3-255 |
| Cow position: | chr3:10347325-10347075 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 31 |
| Conread position: | 3-277 |
| Cow position: | chr3:10958269-10958529 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 30, 131 |
| Conread position: | 3-283 |
| Cow position: | chr3:2396808-2397090 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 59 |
| Conread position: | 3-283 |
| Cow position: | chr3:12711944-12712230 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-283 |
| Cow position: | chr3:59799219-59798947 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 124, 143 |
| Conread position: | 3-283 |
| Cow position: | chr3:70565767-70566045 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 4-267 |
| Cow position: | chr3:15057640-15057889 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 4-279 |
| Cow position: | chr3:26219081-26219364 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 93 |
| Conread position: | 4-283 |
| Cow position: | chr3:55272075-55272347 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 6-270 |
| Cow position: | chr3:49793364-49793121 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 9-283 |
| Cow position: | chr3:2674994-2674722 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 141 |
| Conread position: | 14-151 |
| Cow position: | chr3:26874552-26874412 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 15-276 |
| Cow position: | chr3:53588428-53588692 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 20-252 |
| Cow position: | chr3:26065957-26065725 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 10 |
| Conread position: | 21-267 |
| Cow position: | chr3:54862461-54862715 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 22-238 |
| Cow position: | chr3:75080720-75080504 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 109, 56 |
| Conread position: | 24-272 |
| Cow position: | chr3:27532706-27532959 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 24-283 |
| Cow position: | chr3:82657134-82657392 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 76, 93 |
| Conread position: | 26-276 |
| Cow position: | chr3:54960137-54959891 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 30-253 |
| Cow position: | chr3:38864060-38863836 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 101, 117 |
| Conread position: | 30-263 |
| Cow position: | chr3:30418074-30417842 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 123 |
| Conread position: | 30-272 |
| Cow position: | chr3:66116166-66116407 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 61, 140 |
| Conread position: | 30-298 |
| Cow position: | chr3:12255422-12255159 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 72, 55 |
| Conread position: | 31-234 |
| Cow position: | chr3:54881704-54881498 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 142 |
| Conread position: | 31-306 |
| Cow position: | chr3:48811049-48811314 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 32-210 |
| Cow position: | chr3:68156677-68156496 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 56 |
| Conread position: | 33-252 |
| Cow position: | chr3:68627745-68627951 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 91, 50 |
| Conread position: | 34-283 |
| Cow position: | chr3:30180022-30179777 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 82, 101 |
Show alignments to all cow chromosomes.