Cow genome map
| Conread name: | Lng1-LNG010007H08 |
| Conread position: | 3-163 |
| Cow position: | chr5:70951859-70952018 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 19 |
| Conread position: | 3-215 |
| Cow position: | chr5:69461354-69461144 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 18, 69 |
| Conread position: | 3-223 |
| Cow position: | chr5:57575792-57575567 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 3-228 |
| Cow position: | chr5:23168805-23169022 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 3-252 |
| Cow position: | chr5:21828889-21828637 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 3-252 |
| Cow position: | chr5:30253762-30253518 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 163 |
| Conread position: | 3-283 |
| Cow position: | chr5:61725988-61725712 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 3-285 |
| Cow position: | chr5:34638905-34638625 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 146 |
| Conread position: | 4-276 |
| Cow position: | chr5:34288448-34288721 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 4-283 |
| Cow position: | chr5:5111054-5111335 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-283 |
| Cow position: | chr5:74015962-74015682 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 5-306 |
| Cow position: | chr5:14314547-14314242 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 231 |
| Conread position: | 9-217 |
| Cow position: | chr5:74003618-74003820 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 9-235 |
| Cow position: | chr5:63185237-63185464 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 9-252 |
| Cow position: | chr5:42777780-42777537 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 9-283 |
| Cow position: | chr5:50482851-50483120 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 14-180 |
| Cow position: | chr5:16214693-16214527 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 134, 12 |
| Conread position: | 14-249 |
| Cow position: | chr5:39710851-39710615 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 15-201 |
| Cow position: | chr5:44028294-44028478 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 15-306 |
| Cow position: | chr5:64393170-64392874 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 282 |
| Conread position: | 16-283 |
| Cow position: | chr5:63992164-63992422 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 19-261 |
| Cow position: | chr5:48143779-48144027 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 19-283 |
| Cow position: | chr5:35209470-35209730 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 20-266 |
| Cow position: | chr5:37713892-37714146 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 20-276 |
| Cow position: | chr5:61488104-61488362 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 71, 204 |
| Conread position: | 21-283 |
| Cow position: | chr5:45999016-45999279 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 11, 187 |
| Conread position: | 22-266 |
| Cow position: | chr5:1950061-1950300 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 90 |
| Conread position: | 26-268 |
| Cow position: | chr5:45940615-45940850 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 72 |
| Conread position: | 28-267 |
| Cow position: | chr5:1276468-1276718 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 54, 213 |
| Conread position: | 30-278 |
| Cow position: | chr5:50821776-50821535 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 158 |
| Conread position: | 33-273 |
| Cow position: | chr5:44446877-44447134 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 98, 237 |
Show alignments to all cow chromosomes.