Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 321-559 |
| Cow position: | chr10:20370985-20370750 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 321-754 |
| Cow position: | chr10:26596845-26597298 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 323-750 |
| Cow position: | chr10:11820996-11821448 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 46, 66 |
| Conread position: | 325-754 |
| Cow position: | chr10:38545658-38545233 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 170 |
| Conread position: | 330-632 |
| Cow position: | chr10:38847954-38848268 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 36, 285 |
| Conread position: | 331-555 |
| Cow position: | chr10:42110580-42110811 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 335-754 |
| Cow position: | chr10:22101486-22101918 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 76 |
| Conread position: | 336-623 |
| Cow position: | chr10:15860650-15860371 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 336-754 |
| Cow position: | chr10:8327040-8326613 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 347-659 |
| Cow position: | chr10:14861516-14861839 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 350-658 |
| Cow position: | chr10:28931126-28930805 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 52, 36 |
| Conread position: | 351-723 |
| Cow position: | chr10:21900514-21900133 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 354-746 |
| Cow position: | chr10:31524377-31524773 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 406-745 |
| Cow position: | chr10:62408528-62408173 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 406-746 |
| Cow position: | chr10:21487238-21487593 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 406-754 |
| Cow position: | chr10:19511929-19512290 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 409-754 |
| Cow position: | chr10:7281768-7281408 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 38 |
| Conread position: | 416-753 |
| Cow position: | chr10:14804163-14804513 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 416-754 |
| Cow position: | chr10:280294-279928 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 6 |
| Conread position: | 416-754 |
| Cow position: | chr10:5849299-5848947 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr10:11698571-11698923 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 6 |
| Conread position: | 416-754 |
| Cow position: | chr10:19495959-19495599 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr10:21400344-21399991 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr10:41157774-41158127 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr10:41567429-41567782 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 416-754 |
| Cow position: | chr10:41877245-41877600 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 416-754 |
| Cow position: | chr10:55093592-55093946 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr10:56065000-56065353 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 420-754 |
| Cow position: | chr10:38538166-38537817 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 423-754 |
| Cow position: | chr10:8290319-8290658 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 423-754 |
| Cow position: | chr10:16925876-16926217 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 436-754 |
| Cow position: | chr10:2120657-2120331 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 437-754 |
| Cow position: | chr10:28641888-28642213 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 228 |
| Conread position: | 447-754 |
| Cow position: | chr10:51952263-51951946 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 462-754 |
| Cow position: | chr10:19715187-19714885 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 474-743 |
| Cow position: | chr10:39779630-39779903 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 239 |
| Conread position: | 474-754 |
| Cow position: | chr10:40151850-40151566 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 474-754 |
| Cow position: | chr10:47907320-47907610 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 485-754 |
| Cow position: | chr10:14335440-14335169 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 201 |
| Conread position: | 561-746 |
| Cow position: | chr10:124872-125064 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 564-750 |
| Cow position: | chr10:61927713-61927522 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 108 |
| Conread position: | 569-746 |
| Cow position: | chr10:5675-5859 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 569-751 |
| Cow position: | chr10:8340367-8340554 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 611-754 |
| Cow position: | chr10:49990971-49991121 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.