Cow genome map

Conread name: Lng1-LNG010027H04

Conread position: 320-754
Cow position: chr11:10090549-10091000 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 41

Conread position: 326-565
Cow position: chr11:9220075-9219839 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 28

Conread position: 333-754
Cow position: chr11:58134276-58134712 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 34

Conread position: 351-754
Cow position: chr11:31926078-31926490 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 63

Conread position: 362-561
Cow position: chr11:8261634-8261423 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 370-740
Cow position: chr11:62229129-62229492 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 77

Conread position: 388-754
Cow position: chr11:29668670-29668291 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 390-754
Cow position: chr11:28229818-28229440 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 282

Conread position: 395-668
Cow position: chr11:33978263-33977974 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 76, 12

Conread position: 400-754
Cow position: chr11:84389584-84389949 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 313

Conread position: 402-558
Cow position: chr11:30125286-30125124 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 403-746
Cow position: chr11:31874815-31874460 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 20

Conread position: 405-754
Cow position: chr11:24393282-24393640 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 29

Conread position: 405-754
Cow position: chr11:76374240-76373898 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 30

Conread position: 406-740
Cow position: chr11:41170731-41170382 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 406-754
Cow position: chr11:10847403-10847768 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 406-754
Cow position: chr11:38835470-38835109 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 406-754
Cow position: chr11:44157292-44156928 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 406-754
Cow position: chr11:44251760-44252117 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 406-754
Cow position: chr11:85393850-85393487 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 164

Conread position: 412-746
Cow position: chr11:43514665-43514320 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 32

Conread position: 413-753
Cow position: chr11:5343256-5342900 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 416-746
Cow position: chr11:9734698-9734351 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-750
Cow position: chr11:67846606-67846257 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr11:3492976-3493315 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr11:15983589-15983943 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 416-754
Cow position: chr11:19064284-19063932 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 250

Conread position: 416-754
Cow position: chr11:28108115-28108468 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 6

Conread position: 416-754
Cow position: chr11:33194588-33194237 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 172

Conread position: 416-754
Cow position: chr11:36744215-36743863 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 82

Conread position: 416-754
Cow position: chr11:52419353-52419714 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 22, 304

Conread position: 416-754
Cow position: chr11:61401086-61400742 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 234

Conread position: 416-754
Cow position: chr11:64045963-64046316 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 416-754
Cow position: chr11:73477273-73477626 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 418-754
Cow position: chr11:46246589-46246231 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 250

Conread position: 419-744
Cow position: chr11:9157180-9156845 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 210

Conread position: 419-754
Cow position: chr11:4027589-4027242 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 143

Conread position: 419-754
Cow position: chr11:28054625-28054291 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 75

Conread position: 420-754
Cow position: chr11:12358448-12358099 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 35

Conread position: 422-753
Cow position: chr11:9606603-9606260 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 147

Conread position: 423-753
Cow position: chr11:53432087-53431742 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 426-750
Cow position: chr11:22934784-22935110 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 56

Conread position: 426-754
Cow position: chr11:26124949-26124609 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 295

Conread position: 437-754
Cow position: chr11:57628059-57627720 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 76

Conread position: 449-754
Cow position: chr11:17107687-17107369 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 474-750
Cow position: chr11:20734214-20733928 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 474-754
Cow position: chr11:64082055-64081765 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 479-746
Cow position: chr11:7116253-7116528 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 53

Conread position: 479-754
Cow position: chr11:40775961-40775678 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 111

Conread position: 483-754
Cow position: chr11:63655300-63655019 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 509-754
Cow position: chr11:71329658-71329910 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 532-754
Cow position: chr11:53287077-53286847 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 178
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 549-745
Cow position: chr11:45922505-45922312 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 164, 70

Conread position: 557-745
Cow position: chr11:10051837-10052031 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 118

Conread position: 561-754
Cow position: chr11:44492152-44491954 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 93

Conread position: 577-754
Cow position: chr11:17546301-17546485 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 640-750
Cow position: chr11:37476798-37476684 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.