Cow genome map


           Conread name:
           Lng1-LNG010027H04
        

               Conread position:
               320-754
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               326-565
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 28
               

               Conread position:
               333-754
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               351-754
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               362-561
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               370-740
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 77
               

               Conread position:
               388-754
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               390-754
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 282
               

               Conread position:
               395-668
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               76, 12
               

               Conread position:
               400-754
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 313
               

               Conread position:
               402-558
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               403-746
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               405-754
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               405-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 30
               

               Conread position:
               406-740
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 87
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               412-746
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               413-753
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               416-746
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               416-750
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 172
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               22, 304
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 234
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               418-754
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 250
               

               Conread position:
               419-744
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 210
               

               Conread position:
               419-754
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               419-754
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               420-754
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               422-753
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               423-753
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               426-750
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               426-754
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 295
               

               Conread position:
               437-754
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 76
               

               Conread position:
               449-754
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 166
               

               Conread position:
               474-750
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               474-754
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               479-746
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               479-754
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 111
               

               Conread position:
               483-754
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               509-754
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               532-754
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               549-745
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               164, 70
               

               Conread position:
               557-745
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               79, 118
               

               Conread position:
               561-754
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               577-754
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               640-750
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               
Show alignments to all cow chromosomes.