Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 331-731 |
| Cow position: | chr13:22185290-22184878 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 124 |
| Conread position: | 332-723 |
| Cow position: | chr13:26844057-26844441 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 83 |
| Conread position: | 338-734 |
| Cow position: | chr13:31556751-31556353 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 339-744 |
| Cow position: | chr13:1593191-1592776 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 34 |
| Conread position: | 339-750 |
| Cow position: | chr13:34937446-34937863 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 304 |
| Conread position: | 342-754 |
| Cow position: | chr13:4483761-4484185 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 362-753 |
| Cow position: | chr13:6668136-6667730 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 60 |
| Conread position: | 387-754 |
| Cow position: | chr13:15520489-15520121 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 395-724 |
| Cow position: | chr13:11064153-11063817 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 406-746 |
| Cow position: | chr13:9044527-9044883 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 406-746 |
| Cow position: | chr13:23003282-23002926 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 406-754 |
| Cow position: | chr13:3654297-3653934 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 406-754 |
| Cow position: | chr13:15924357-15923993 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 406-754 |
| Cow position: | chr13:34868769-34869131 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 408-754 |
| Cow position: | chr13:27922197-27921846 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 416-753 |
| Cow position: | chr13:13324780-13325132 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-753 |
| Cow position: | chr13:30244647-30244295 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr13:3058079-3057726 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 416-754 |
| Cow position: | chr13:31734054-31733701 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 261 |
| Conread position: | 416-754 |
| Cow position: | chr13:47229970-47229617 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 416-754 |
| Cow position: | chr13:49973715-49974068 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 416-754 |
| Cow position: | chr13:60466368-60466717 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 418-750 |
| Cow position: | chr13:50109495-50109840 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 419-746 |
| Cow position: | chr13:34042329-34041991 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 297 |
| Conread position: | 420-751 |
| Cow position: | chr13:30303319-30303665 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 343 |
| Conread position: | 422-753 |
| Cow position: | chr13:35030592-35030923 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 423-754 |
| Cow position: | chr13:32737777-32737438 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 423-754 |
| Cow position: | chr13:33336374-33336040 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 437-754 |
| Cow position: | chr13:17308528-17308854 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 447-754 |
| Cow position: | chr13:2388755-2388427 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 474-751 |
| Cow position: | chr13:30656879-30656595 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 281 |
| Conread position: | 474-754 |
| Cow position: | chr13:41315953-41316243 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 479-750 |
| Cow position: | chr13:21840099-21839818 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 479-754 |
| Cow position: | chr13:58118808-58118524 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 485-754 |
| Cow position: | chr13:15450999-15450725 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 485-754 |
| Cow position: | chr13:31612197-31611917 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 485-754 |
| Cow position: | chr13:32545488-32545767 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 487-754 |
| Cow position: | chr13:676970-677259 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 518-754 |
| Cow position: | chr13:13900010-13900255 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 570-746 |
| Cow position: | chr13:18331607-18331790 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 152 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 600-754 |
| Cow position: | chr13:12063726-12063565 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.