Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 322-619 |
| Cow position: | chr15:36642754-36643059 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 323-734 |
| Cow position: | chr15:24794188-24794595 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 85 |
| Conread position: | 325-752 |
| Cow position: | chr15:20357073-20356653 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 325-753 |
| Cow position: | chr15:21449524-21449950 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 330-754 |
| Cow position: | chr15:7544713-7545145 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 339-754 |
| Cow position: | chr15:2076489-2076912 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 339-754 |
| Cow position: | chr15:12421324-12420898 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 34 |
| Conread position: | 339-754 |
| Cow position: | chr15:24294933-24295362 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 340-740 |
| Cow position: | chr15:21950276-21949880 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 111, 22 |
| Conread position: | 351-754 |
| Cow position: | chr15:40105719-40106126 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 190 |
| Conread position: | 362-754 |
| Cow position: | chr15:35735431-35735838 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 392-754 |
| Cow position: | chr15:30810893-30811254 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 399-746 |
| Cow position: | chr15:8750327-8750681 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 399-746 |
| Cow position: | chr15:32673650-32673297 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 400-754 |
| Cow position: | chr15:10888517-10888880 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 139 |
| Conread position: | 405-746 |
| Cow position: | chr15:44069831-44070179 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 406-750 |
| Cow position: | chr15:19738149-19737793 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 353 |
| Conread position: | 406-751 |
| Cow position: | chr15:18332924-18332569 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 294 |
| Conread position: | 406-754 |
| Cow position: | chr15:4922055-4922418 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 406-754 |
| Cow position: | chr15:6156049-6155681 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 406-754 |
| Cow position: | chr15:8099392-8099743 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 158 |
| Conread position: | 406-754 |
| Cow position: | chr15:15347215-15346852 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 406-754 |
| Cow position: | chr15:31358790-31359149 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 314 |
| Conread position: | 406-754 |
| Cow position: | chr15:32494482-32494122 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 413-754 |
| Cow position: | chr15:4142913-4142556 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 414-746 |
| Cow position: | chr15:44828705-44829054 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 416-754 |
| Cow position: | chr15:444517-444867 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 6 |
| Conread position: | 416-754 |
| Cow position: | chr15:1772407-1772760 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr15:1882597-1882244 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr15:18268078-18267725 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr15:28490232-28489886 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 280 |
| Conread position: | 416-754 |
| Cow position: | chr15:36970833-36971179 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 416-754 |
| Cow position: | chr15:50124033-50123680 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr15:50146987-50147329 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 186 |
| Conread position: | 419-750 |
| Cow position: | chr15:4671348-4671696 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 419-753 |
| Cow position: | chr15:315942-315594 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 215 |
| Conread position: | 419-754 |
| Cow position: | chr15:18576631-18576978 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 159 |
| Conread position: | 419-754 |
| Cow position: | chr15:42936631-42936976 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 423-754 |
| Cow position: | chr15:21665824-21665483 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 296 |
| Conread position: | 424-746 |
| Cow position: | chr15:7837169-7837503 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 437-754 |
| Cow position: | chr15:1519219-1518888 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 437-754 |
| Cow position: | chr15:3009920-3009590 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 59 |
| Conread position: | 437-754 |
| Cow position: | chr15:4196394-4196724 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 437-754 |
| Cow position: | chr15:17080271-17079941 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 449-676 |
| Cow position: | chr15:43618373-43618597 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 450-738 |
| Cow position: | chr15:36626345-36626044 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 280 |
| Conread position: | 474-745 |
| Cow position: | chr15:5980334-5980617 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 475-753 |
| Cow position: | chr15:14582372-14582094 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 38 |
| Conread position: | 479-754 |
| Cow position: | chr15:3261351-3261067 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 218 |
| Conread position: | 479-754 |
| Cow position: | chr15:4812585-4812862 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 174 |
| Conread position: | 481-753 |
| Cow position: | chr15:32720758-32720474 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 532-754 |
| Cow position: | chr15:789540-789310 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 532-754 |
| Cow position: | chr15:38980702-38980932 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 580-749 |
| Cow position: | chr15:4678387-4678562 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 591-754 |
| Cow position: | chr15:1782315-1782485 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 631-744 |
| Cow position: | chr15:31862418-31862301 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.