Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 325-744 |
| Cow position: | chr16:25257412-25257846 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 90 |
| Conread position: | 337-710 |
| Cow position: | chr16:25156393-25156005 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 337-754 |
| Cow position: | chr16:16272114-16271691 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 338-754 |
| Cow position: | chr16:49235332-49234911 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 37 |
| Conread position: | 339-753 |
| Cow position: | chr16:2411475-2411048 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 341-745 |
| Cow position: | chr16:29983340-29983752 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 353-745 |
| Cow position: | chr16:42739594-42739197 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 185 |
| Conread position: | 354-754 |
| Cow position: | chr16:29033553-29033973 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 386-754 |
| Cow position: | chr16:836584-836962 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 386-754 |
| Cow position: | chr16:14666274-14665892 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 84 |
| Conread position: | 392-746 |
| Cow position: | chr16:25085186-25085531 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 212 |
| Conread position: | 397-754 |
| Cow position: | chr16:31592352-31591993 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 405-754 |
| Cow position: | chr16:10437797-10438156 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 262 |
| Conread position: | 406-746 |
| Cow position: | chr16:407474-407122 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 406-746 |
| Cow position: | chr16:1567897-1567541 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 406-750 |
| Cow position: | chr16:2727731-2727372 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 356 |
| Conread position: | 406-753 |
| Cow position: | chr16:26663306-26663669 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 406-754 |
| Cow position: | chr16:5483880-5484240 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 406-754 |
| Cow position: | chr16:8816547-8816185 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 406-754 |
| Cow position: | chr16:12538368-12538005 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 406-754 |
| Cow position: | chr16:28471545-28471182 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 406-754 |
| Cow position: | chr16:29046579-29046942 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 214 |
| Conread position: | 406-754 |
| Cow position: | chr16:43897714-43897352 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 214 |
| Conread position: | 416-753 |
| Cow position: | chr16:53045915-53046267 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr16:5661411-5661763 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr16:28170802-28170452 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 416-754 |
| Cow position: | chr16:31832193-31832546 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 419-740 |
| Cow position: | chr16:2483572-2483234 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 419-754 |
| Cow position: | chr16:15566312-15566662 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 423-754 |
| Cow position: | chr16:23252932-23252589 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 423-754 |
| Cow position: | chr16:25341541-25341878 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 429-746 |
| Cow position: | chr16:9930515-9930846 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 256 |
| Conread position: | 437-754 |
| Cow position: | chr16:4302748-4302420 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 167 |
| Conread position: | 437-754 |
| Cow position: | chr16:10375995-10375679 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 190 |
| Conread position: | 437-754 |
| Cow position: | chr16:41163476-41163149 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 288 |
| Conread position: | 496-753 |
| Cow position: | chr16:15492881-15493149 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 523-754 |
| Cow position: | chr16:28197998-28197758 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 550-745 |
| Cow position: | chr16:12670172-12669978 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 135 |
| Conread position: | 550-754 |
| Cow position: | chr16:6943312-6943523 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 561-754 |
| Cow position: | chr16:1431906-1432110 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 573-754 |
| Cow position: | chr16:37456293-37456106 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 575-754 |
| Cow position: | chr16:17057512-17057334 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 84 |
| Conread position: | 633-754 |
| Cow position: | chr16:28377012-28377137 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 640-754 |
| Cow position: | chr16:11283111-11283229 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.