Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 315-731 |
| Cow position: | chr2:11692262-11692666 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 316-703 |
| Cow position: | chr2:5963386-5962984 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 323-596 |
| Cow position: | chr2:1362870-1363147 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 39 |
| Conread position: | 325-632 |
| Cow position: | chr2:7902732-7903038 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 31 |
| Conread position: | 338-751 |
| Cow position: | chr2:199064-198643 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 30 |
| Conread position: | 339-754 |
| Cow position: | chr2:24146585-24147012 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 34 |
| Conread position: | 339-754 |
| Cow position: | chr2:36980101-36980527 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 344-754 |
| Cow position: | chr2:20902800-20902406 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 209, 58 |
| Conread position: | 348-746 |
| Cow position: | chr2:42333123-42332726 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 351-746 |
| Cow position: | chr2:34564874-34564478 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 351-753 |
| Cow position: | chr2:28643082-28642674 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 23 |
| Conread position: | 351-754 |
| Cow position: | chr2:36030600-36030212 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 67 |
| Conread position: | 362-705 |
| Cow position: | chr2:20920695-20920358 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 365-746 |
| Cow position: | chr2:11729619-11730001 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 365-754 |
| Cow position: | chr2:41686254-41686655 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 386-754 |
| Cow position: | chr2:47603477-47603100 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 398-746 |
| Cow position: | chr2:53329537-53329899 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 401-754 |
| Cow position: | chr2:10268871-10268513 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 405-754 |
| Cow position: | chr2:28793044-28793400 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 406-745 |
| Cow position: | chr2:52062456-52062807 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 406-754 |
| Cow position: | chr2:10186444-10186083 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 205 |
| Conread position: | 406-754 |
| Cow position: | chr2:11159338-11158974 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 413-753 |
| Cow position: | chr2:54737297-54737651 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 413-754 |
| Cow position: | chr2:49590190-49590547 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 413-754 |
| Cow position: | chr2:57334985-57335342 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 413-754 |
| Cow position: | chr2:59413891-59413535 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 416-746 |
| Cow position: | chr2:39421372-39421715 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 190 |
| Conread position: | 416-753 |
| Cow position: | chr2:9907706-9908058 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-753 |
| Cow position: | chr2:25030683-25030335 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 416-754 |
| Cow position: | chr2:2088380-2088027 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr2:3324771-3324414 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr2:5474309-5474662 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr2:47038621-47038268 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr2:49472040-49472393 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr2:57588489-57588842 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 417-754 |
| Cow position: | chr2:10611832-10611485 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 157 |
| Conread position: | 419-754 |
| Cow position: | chr2:2380904-2381253 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 419-754 |
| Cow position: | chr2:13045904-13045558 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 301 |
| Conread position: | 419-754 |
| Cow position: | chr2:22077580-22077930 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 420-751 |
| Cow position: | chr2:28650426-28650083 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 33 |
| Conread position: | 423-754 |
| Cow position: | chr2:282885-282540 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 423-754 |
| Cow position: | chr2:16900056-16900398 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 426-754 |
| Cow position: | chr2:5870547-5870216 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 72 |
| Conread position: | 436-754 |
| Cow position: | chr2:5905045-5904715 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 240 |
| Conread position: | 437-750 |
| Cow position: | chr2:2412981-2412654 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 445-754 |
| Cow position: | chr2:51990425-51990103 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 447-754 |
| Cow position: | chr2:4403332-4403011 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 447-754 |
| Cow position: | chr2:26921510-26921822 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 447-754 |
| Cow position: | chr2:80955811-80955490 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 461-751 |
| Cow position: | chr2:80293108-80292810 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 263 |
| Conread position: | 478-754 |
| Cow position: | chr2:31297659-31297943 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 479-754 |
| Cow position: | chr2:212361-212076 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 479-754 |
| Cow position: | chr2:42671125-42670843 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 485-754 |
| Cow position: | chr2:44935053-44934770 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 485-754 |
| Cow position: | chr2:72597479-72597753 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 125 |
| Conread position: | 498-750 |
| Cow position: | chr2:41657063-41657317 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 523-754 |
| Cow position: | chr2:32066171-32065933 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 176 |
| Conread position: | 557-754 |
| Cow position: | chr2:78742520-78742715 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 584-754 |
| Cow position: | chr2:54485754-54485577 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 603-736 |
| Cow position: | chr2:41150614-41150750 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 622-746 |
| Cow position: | chr2:573607-573731 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 631-754 |
| Cow position: | chr2:365040-364913 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.