Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 314-656 |
| Cow position: | chr3:64357749-64357411 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 148, 71 |
| Conread position: | 321-746 |
| Cow position: | chr3:2907660-2907244 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 322-754 |
| Cow position: | chr3:31415639-31416066 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 323-754 |
| Cow position: | chr3:57589671-57590110 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 323-754 |
| Cow position: | chr3:58947721-58948150 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 42 |
| Conread position: | 337-696 |
| Cow position: | chr3:26836648-26836317 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 217, 24 |
| Conread position: | 339-753 |
| Cow position: | chr3:5883654-5884075 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 351-746 |
| Cow position: | chr3:52864015-52863602 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 351-751 |
| Cow position: | chr3:48230335-48229934 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 352-754 |
| Cow position: | chr3:6685925-6686345 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 155 |
| Conread position: | 375-754 |
| Cow position: | chr3:23290188-23289801 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 387-754 |
| Cow position: | chr3:18463412-18463032 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 395-713 |
| Cow position: | chr3:16073899-16074217 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 405-754 |
| Cow position: | chr3:49137358-49137006 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 406-710 |
| Cow position: | chr3:36881744-36881425 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 406-746 |
| Cow position: | chr3:57484552-57484198 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 170 |
| Conread position: | 406-753 |
| Cow position: | chr3:64017187-64016829 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 406-754 |
| Cow position: | chr3:7481054-7480696 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 173 |
| Conread position: | 406-754 |
| Cow position: | chr3:18811678-18812042 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 406-754 |
| Cow position: | chr3:19756781-19756416 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 406-754 |
| Cow position: | chr3:34030721-34030360 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 406-754 |
| Cow position: | chr3:72630248-72630608 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 406-754 |
| Cow position: | chr3:75040992-75040628 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 408-754 |
| Cow position: | chr3:63003366-63003013 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 137 |
| Conread position: | 410-745 |
| Cow position: | chr3:51940225-51939900 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 412-750 |
| Cow position: | chr3:45032918-45033272 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 412-753 |
| Cow position: | chr3:50011857-50012203 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 412-754 |
| Cow position: | chr3:19736758-19737115 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 416-750 |
| Cow position: | chr3:68699791-68699435 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr3:2917643-2917995 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 416-754 |
| Cow position: | chr3:19878840-19879192 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 416-754 |
| Cow position: | chr3:32622855-32622510 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 310 |
| Conread position: | 416-754 |
| Cow position: | chr3:36117845-36118196 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 214 |
| Conread position: | 416-754 |
| Cow position: | chr3:46679613-46679965 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr3:64027904-64027551 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 417-754 |
| Cow position: | chr3:37969230-37969580 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 419-754 |
| Cow position: | chr3:3523207-3523554 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 199 |
| Conread position: | 419-754 |
| Cow position: | chr3:66890777-66890428 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 420-746 |
| Cow position: | chr3:46502727-46503065 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 420-754 |
| Cow position: | chr3:56340233-56339887 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 423-745 |
| Cow position: | chr3:49545011-49544682 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 423-753 |
| Cow position: | chr3:10239849-10240195 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 423-754 |
| Cow position: | chr3:40823583-40823925 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 39 |
| Conread position: | 426-754 |
| Cow position: | chr3:59861565-59861907 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 437-751 |
| Cow position: | chr3:49613773-49613444 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 437-753 |
| Cow position: | chr3:41211533-41211201 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 447-750 |
| Cow position: | chr3:68873541-68873224 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 447-754 |
| Cow position: | chr3:22336102-22336423 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 447-754 |
| Cow position: | chr3:24314681-24315001 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 227 |
| Conread position: | 447-754 |
| Cow position: | chr3:29331057-29330736 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 447-754 |
| Cow position: | chr3:64650840-64651161 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 468-754 |
| Cow position: | chr3:7158480-7158181 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 475-754 |
| Cow position: | chr3:47081165-47080876 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 478-754 |
| Cow position: | chr3:27918684-27918969 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 517-754 |
| Cow position: | chr3:51242660-51242905 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 538-754 |
| Cow position: | chr3:47177965-47177741 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 549-754 |
| Cow position: | chr3:4286121-4286333 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 560-754 |
| Cow position: | chr3:2710531-2710330 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 579-753 |
| Cow position: | chr3:19944610-19944786 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 599-751 |
| Cow position: | chr3:38493627-38493785 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 642-754 |
| Cow position: | chr3:19800759-19800643 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
Show alignments to all cow chromosomes.