Cow genome map


           Conread name:
           Lng1-LNG010027H04
        

               Conread position:
               333-754
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               336-695
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               115, 25
               

               Conread position:
               339-754
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 31
               

               Conread position:
               339-754
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               354-573
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 14
               

               Conread position:
               383-754
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               399-754
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 6
               

               Conread position:
               400-746
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 45
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               31, 88
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 219
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               406-754
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               412-754
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               416-754
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               419-746
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               419-754
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 155
               

               Conread position:
               419-754
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 300
               

               Conread position:
               419-754
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               420-752
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 72
               

               Conread position:
               420-754
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               421-754
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               423-750
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               423-754
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               423-754
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               423-754
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 296
               

               Conread position:
               437-754
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               442-754
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 67
               

               Conread position:
               445-754
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               445-754
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               447-750
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               448-754
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               454-746
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 265
               

               Conread position:
               458-754
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               459-750
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 38
               

               Conread position:
               469-754
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               470-754
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 196
               

               Conread position:
               470-754
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               66, 121
               

               Conread position:
               474-753
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               474-753
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 193
               

               Conread position:
               474-754
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               485-754
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 94
               

               Conread position:
               486-754
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               542-753
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               546-754
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               568-751
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               572-754
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               579-750
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               601-753
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               645-753
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               652-754
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               659-754
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               56, 0
               
Show alignments to all cow chromosomes.