Cow genome map
| Conread name: | Lng1-LNG010027H04 |
| Conread position: | 323-754 |
| Cow position: | chr9:32969035-32969456 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 326-754 |
| Cow position: | chr9:6249383-6249805 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 47 |
| Conread position: | 332-751 |
| Cow position: | chr9:3803414-3803845 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 91 |
| Conread position: | 335-754 |
| Cow position: | chr9:3566771-3566330 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 339-746 |
| Cow position: | chr9:29628662-29628249 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 348-754 |
| Cow position: | chr9:13476802-13476375 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 14 |
| Conread position: | 349-754 |
| Cow position: | chr9:20309057-20308644 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 354-754 |
| Cow position: | chr9:64119322-64119723 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 95 |
| Conread position: | 368-740 |
| Cow position: | chr9:60464523-60464143 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 53 |
| Conread position: | 375-754 |
| Cow position: | chr9:1980102-1980496 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 400-754 |
| Cow position: | chr9:42569043-42569408 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 403-754 |
| Cow position: | chr9:3006093-3005739 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 405-746 |
| Cow position: | chr9:240366-240044 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 87, 48 |
| Conread position: | 406-712 |
| Cow position: | chr9:37971062-37970749 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 292 |
| Conread position: | 406-746 |
| Cow position: | chr9:59174012-59173648 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 406-750 |
| Cow position: | chr9:59536243-59536597 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 155 |
| Conread position: | 406-751 |
| Cow position: | chr9:6830361-6830002 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 210 |
| Conread position: | 406-754 |
| Cow position: | chr9:16175915-16176277 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 406-754 |
| Cow position: | chr9:30672516-30672872 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 406-754 |
| Cow position: | chr9:51182046-51181679 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 190 |
| Conread position: | 411-754 |
| Cow position: | chr9:18509648-18509293 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 415-749 |
| Cow position: | chr9:5004151-5004482 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 416-753 |
| Cow position: | chr9:51210834-51211186 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr9:2487978-2487613 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr9:25035693-25035340 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 416-754 |
| Cow position: | chr9:27934241-27934593 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 416-754 |
| Cow position: | chr9:28678125-28678478 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 416-754 |
| Cow position: | chr9:36724654-36725007 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 216 |
| Conread position: | 419-746 |
| Cow position: | chr9:22653727-22654070 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 419-754 |
| Cow position: | chr9:31064589-31064938 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 420-754 |
| Cow position: | chr9:29028037-29027696 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 420-754 |
| Cow position: | chr9:37162651-37162308 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 294 |
| Conread position: | 421-754 |
| Cow position: | chr9:45873503-45873851 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 211 |
| Conread position: | 422-754 |
| Cow position: | chr9:64018303-64017956 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 423-754 |
| Cow position: | chr9:9013264-9013607 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 146 |
| Conread position: | 423-754 |
| Cow position: | chr9:42309849-42310193 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 423-754 |
| Cow position: | chr9:60277856-60277510 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 426-754 |
| Cow position: | chr9:27034849-27035188 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 437-754 |
| Cow position: | chr9:1251820-1251492 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 437-754 |
| Cow position: | chr9:30826856-30827185 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 447-754 |
| Cow position: | chr9:780620-780299 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 447-754 |
| Cow position: | chr9:1076013-1075692 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 450-754 |
| Cow position: | chr9:28439996-28440313 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 181 |
| Conread position: | 458-754 |
| Cow position: | chr9:17064192-17063882 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 469-754 |
| Cow position: | chr9:31807782-31808076 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 470-754 |
| Cow position: | chr9:3543056-3543350 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 474-754 |
| Cow position: | chr9:50790929-50791217 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 234 |
| Conread position: | 496-753 |
| Cow position: | chr9:34722153-34722409 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 61 |
| Conread position: | 509-746 |
| Cow position: | chr9:44795528-44795768 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 195 |
| Conread position: | 551-754 |
| Cow position: | chr9:59482503-59482295 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 83, 69 |
| Conread position: | 554-752 |
| Cow position: | chr9:828823-828634 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 567-754 |
| Cow position: | chr9:3998323-3998517 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 568-754 |
| Cow position: | chr9:4943500-4943307 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 640-754 |
| Cow position: | chr9:40223676-40223794 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.