Cow genome map

Conread name: Lng1-LNG010059B05

Conread position: 5-252
Cow position: chr1:86610039-86610289 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 18

Conread position: 25-247
Cow position: chr1:77656312-77656537 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 32

Conread position: 25-671
Cow position: chr1:55321927-55321278 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 8

Conread position: 25-743
Cow position: chr1:88269993-88269287 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 8

Conread position: 49-248
Cow position: chr1:38387102-38386900 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 115, 46

Conread position: 49-773
Cow position: chr1:67287077-67287800 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 43

Conread position: 50-439
Cow position: chr1:40512802-40512406 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 42

Conread position: 78-773
Cow position: chr1:8825334-8826027 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 18

Conread position: 93-771
Cow position: chr1:23052087-23052740 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 28

Conread position: 98-760
Cow position: chr1:63605475-63604810 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 98-771
Cow position: chr1:61309524-61310198 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 503

Conread position: 98-773
Cow position: chr1:56144037-56143357 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 39

Conread position: 99-767
Cow position: chr1:3385718-3385052 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 99-773
Cow position: chr1:25179728-25179050 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 6

Conread position: 99-773
Cow position: chr1:28873376-28874060 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 23

Conread position: 99-773
Cow position: chr1:30534722-30534041 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:42736754-42737437 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:49973888-49973208 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 99-773
Cow position: chr1:52358975-52358279 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 23

Conread position: 99-773
Cow position: chr1:57568254-57568912 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:62244345-62243664 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:65386630-65387299 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 99-773
Cow position: chr1:68607241-68606562 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 20

Conread position: 99-773
Cow position: chr1:69403282-69403985 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:73070754-73070079 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:76545236-76544556 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 99-773
Cow position: chr1:82923877-82923208 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 6

Conread position: 99-773
Cow position: chr1:88131073-88131753 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:93854823-93855496 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 21

Conread position: 99-773
Cow position: chr1:94659984-94660654 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:99913719-99914405 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr1:102434737-102434061 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 100-594
Cow position: chr1:29033418-29033924 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 12

Conread position: 100-773
Cow position: chr1:12061910-12061234 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 22

Conread position: 100-773
Cow position: chr1:72186574-72185902 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 103-754
Cow position: chr1:79456668-79456010 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 314

Conread position: 103-773
Cow position: chr1:33551228-33551906 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 314

Conread position: 103-773
Cow position: chr1:58336139-58336817 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 103-773
Cow position: chr1:69922134-69921455 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 315

Conread position: 105-247
Cow position: chr1:69537204-69537350 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 105-326
Cow position: chr1:33712371-33712596 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 182

Conread position: 105-773
Cow position: chr1:72081086-72081746 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 41

Conread position: 106-772
Cow position: chr1:48246155-48246815 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 13

Conread position: 106-773
Cow position: chr1:21999647-21998975 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 15

Conread position: 107-761
Cow position: chr1:76752342-76751682 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 14

Conread position: 107-773
Cow position: chr1:79636625-79636002 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 47

Conread position: 109-773
Cow position: chr1:22842957-22843621 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 27

Conread position: 110-265
Cow position: chr1:45019565-45019410 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 27

Conread position: 117-771
Cow position: chr1:21087726-21088391 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 495

Conread position: 119-769
Cow position: chr1:33851590-33852263 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 503

Conread position: 119-771
Cow position: chr1:89425886-89426550 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 485

Conread position: 121-771
Cow position: chr1:8554644-8555306 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 74

Conread position: 127-668
Cow position: chr1:40053678-40054228 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 129

Conread position: 127-769
Cow position: chr1:31397013-31397667 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 470

Conread position: 127-771
Cow position: chr1:60339628-60340277 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 127

Conread position: 127-771
Cow position: chr1:86547812-86547164 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 98

Conread position: 134-773
Cow position: chr1:31365753-31365118 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 173

Conread position: 137-671
Cow position: chr1:95239702-95240245 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 238

Conread position: 151-773
Cow position: chr1:55156650-55156022 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 11

Conread position: 163-773
Cow position: chr1:5502332-5502946 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 318

Conread position: 181-773
Cow position: chr1:25550344-25550941 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 175

Conread position: 200-670
Cow position: chr1:89481189-89481642 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 108

Conread position: 232-773
Cow position: chr1:55777016-55777563 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 13

Conread position: 245-773
Cow position: chr1:6194683-6195214 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 167

Conread position: 259-773
Cow position: chr1:1460726-1460217 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 144

Conread position: 272-771
Cow position: chr1:86610619-86611124 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 341
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 114, 63

Conread position: 280-773
Cow position: chr1:76621204-76620704 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 328

Conread position: 309-773
Cow position: chr1:79111001-79111468 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 346-773
Cow position: chr1:98785261-98785683 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 254
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 96, 10

Conread position: 380-760
Cow position: chr1:22344671-22345045 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 164, 76

Conread position: 380-761
Cow position: chr1:18139867-18139485 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 250
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 64

Conread position: 380-768
Cow position: chr1:62805585-62805206 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 22

Conread position: 380-773
Cow position: chr1:63502417-63502808 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 380-773
Cow position: chr1:72038967-72038590 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 48

Conread position: 380-773
Cow position: chr1:72984091-72984482 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 18

Conread position: 396-742
Cow position: chr1:88564199-88563856 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 30

Conread position: 413-771
Cow position: chr1:81863889-81863527 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 191

Conread position: 417-773
Cow position: chr1:18241891-18241540 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 187

Conread position: 426-771
Cow position: chr1:28711519-28711869 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 177

Conread position: 432-773
Cow position: chr1:85779802-85779467 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 170

Conread position: 441-773
Cow position: chr1:27178825-27178483 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 158

Conread position: 441-773
Cow position: chr1:40512367-40512033 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 29, 154

Conread position: 449-771
Cow position: chr1:20829563-20829879 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 155

Conread position: 469-773
Cow position: chr1:38416565-38416856 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 480-771
Cow position: chr1:30283013-30282723 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 101

Conread position: 488-773
Cow position: chr1:58883088-58882803 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 89

Conread position: 502-725
Cow position: chr1:18015985-18016201 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 90

Conread position: 529-773
Cow position: chr1:18027061-18026819 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 69

Conread position: 537-773
Cow position: chr1:57697410-57697186 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 549-762
Cow position: chr1:53364301-53364521 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 47, 134

Conread position: 559-773
Cow position: chr1:102781531-102781316 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 45

Conread position: 563-773
Cow position: chr1:29979159-29978950 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 11

Show alignments to all cow chromosomes.