Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               5-252
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 18
               

               Conread position:
               25-247
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               25-671
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 8
               

               Conread position:
               25-743
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               49-248
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               49-773
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               50-439
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               78-773
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               93-771
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 28
               

               Conread position:
               98-760
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 15
               

               Conread position:
               98-771
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               421, 503
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               99-767
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               100-594
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               103-754
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 314
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 314
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 315
               

               Conread position:
               105-247
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               105-326
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 182
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               106-772
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               107-761
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               107-773
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               109-773
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               110-265
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 495
               

               Conread position:
               119-769
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 503
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 485
               

               Conread position:
               121-771
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 74
               

               Conread position:
               127-668
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 129
               

               Conread position:
               127-769
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 470
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 127
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               134-773
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 173
               

               Conread position:
               137-671
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 238
               

               Conread position:
               151-773
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               163-773
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 318
               

               Conread position:
               181-773
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 175
               

               Conread position:
               200-670
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               232-773
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               245-773
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 167
               

               Conread position:
               259-773
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 144
               

               Conread position:
               272-771
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               341
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               114, 63
               

               Conread position:
               280-773
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 328
               

               Conread position:
               309-773
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               346-773
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               380-760
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               164, 76
               

               Conread position:
               380-761
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               380-768
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 48
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               396-742
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 30
               

               Conread position:
               413-771
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 191
               

               Conread position:
               417-773
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 187
               

               Conread position:
               426-771
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 177
               

               Conread position:
               432-773
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 170
               

               Conread position:
               441-773
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               26, 158
               

               Conread position:
               441-773
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               29, 154
               

               Conread position:
               449-771
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               18, 155
               

               Conread position:
               469-773
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               480-771
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               41, 101
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 89
               

               Conread position:
               502-725
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               529-773
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               537-773
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               549-762
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 134
               

               Conread position:
               559-773
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               563-773
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               112, 11
               
Show alignments to all cow chromosomes.