Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 24-671 |
| Cow position: | chr10:31524349-31524980 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 25-498 |
| Cow position: | chr10:14861497-14861978 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 25-773 |
| Cow position: | chr10:38545657-38544916 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 49-358 |
| Cow position: | chr10:28931124-28930805 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 49-773 |
| Cow position: | chr10:26596876-26597615 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 78-354 |
| Cow position: | chr10:54978945-54978679 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 98-773 |
| Cow position: | chr10:22101564-22102240 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 99-331 |
| Cow position: | chr10:38848039-38848270 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 99-741 |
| Cow position: | chr10:16925861-16926505 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr10:7281768-7281088 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr10:8290304-8290981 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr10:21487241-21487921 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr10:29846326-29845645 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr10:38345036-38344357 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 99-774 |
| Cow position: | chr10:19511932-19512594 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 100-771 |
| Cow position: | chr10:38538178-38537500 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 100-773 |
| Cow position: | chr10:30685186-30684510 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 5 |
| Conread position: | 103-773 |
| Cow position: | chr10:62408523-62407841 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 506 |
| Conread position: | 106-773 |
| Cow position: | chr10:39040968-39040305 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 108-773 |
| Cow position: | chr10:66900026-66899366 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 111-254 |
| Cow position: | chr10:8339733-8339879 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 116-394 |
| Cow position: | chr10:10582146-10582423 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 117-771 |
| Cow position: | chr10:39180119-39180790 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 119-771 |
| Cow position: | chr10:41877254-41877918 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 127-767 |
| Cow position: | chr10:21740406-21739753 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 160 |
| Conread position: | 127-771 |
| Cow position: | chr10:28641885-28642534 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 227 |
| Conread position: | 130-277 |
| Cow position: | chr10:42751328-42751481 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 140-771 |
| Cow position: | chr10:11698602-11699244 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 89 |
| Conread position: | 155-589 |
| Cow position: | chr10:19715187-19714744 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 164-773 |
| Cow position: | chr10:40151855-40151243 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 176-773 |
| Cow position: | chr10:14335444-14334846 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 205 |
| Conread position: | 236-750 |
| Cow position: | chr10:50135021-50135541 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 68 |
| Conread position: | 243-771 |
| Cow position: | chr10:11685180-11684645 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 204 |
| Conread position: | 245-773 |
| Cow position: | chr10:58596875-58597381 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 247-675 |
| Cow position: | chr10:57482571-57482149 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 57 |
| Conread position: | 258-773 |
| Cow position: | chr10:124872-125395 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 347 |
| Conread position: | 261-642 |
| Cow position: | chr10:61927713-61927331 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 72 |
| Conread position: | 271-773 |
| Cow position: | chr10:42749345-42749831 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 285-773 |
| Cow position: | chr10:29632258-29631765 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 295-769 |
| Cow position: | chr10:33347865-33348345 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 134 |
| Conread position: | 298-670 |
| Cow position: | chr10:46196027-46196410 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 322-773 |
| Cow position: | chr10:42110954-42111428 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 158 |
| Conread position: | 389-771 |
| Cow position: | chr10:34285873-34286258 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 215 |
| Conread position: | 437-769 |
| Cow position: | chr10:28929286-28928963 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 459-769 |
| Cow position: | chr10:9593268-9592960 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 140 |
| Conread position: | 480-773 |
| Cow position: | chr10:186802-187099 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 488-773 |
| Cow position: | chr10:1378224-1378509 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 501-773 |
| Cow position: | chr10:39779388-39779118 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 524-771 |
| Cow position: | chr10:27664510-27664264 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 528-773 |
| Cow position: | chr10:32701489-32701728 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 13, 64 |
| Conread position: | 563-771 |
| Cow position: | chr10:47083974-47083768 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 109, 36 |
Show alignments to all cow chromosomes.