Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               16-771
               

               Cow position:
               
               

               Alignm length:
               784
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               24-486
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 11
               

               Conread position:
               44-771
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               44-773
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               575
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               67-660
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 25
               

               Conread position:
               78-773
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 19
               

               Conread position:
               93-426
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 42
               

               Conread position:
               98-221
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               99-726
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               433
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               99-771
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 410
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               100-591
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 254
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 92
               

               Conread position:
               105-247
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               105-247
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               105-273
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               105-485
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               108-773
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               114-481
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               129, 7
               

               Conread position:
               114-769
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 173
               

               Conread position:
               115-251
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               116-562
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 144
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 190
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 497
               

               Conread position:
               121-773
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 485
               

               Conread position:
               127-773
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               128-444
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               130-772
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 41
               

               Conread position:
               137-771
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 322
               

               Conread position:
               137-771
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 347
               

               Conread position:
               155-672
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               173-773
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               176-594
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               187-773
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 140
               

               Conread position:
               192-766
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               202-773
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 213
               

               Conread position:
               237-673
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               276-773
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               378-771
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 8
               

               Conread position:
               380-751
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               381-773
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 217
               

               Conread position:
               386-773
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               388-750
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               398-773
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               429-773
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               35, 173
               

               Conread position:
               434-771
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 170
               

               Conread position:
               441-592
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               79, 95
               

               Conread position:
               478-720
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 111
               

               Conread position:
               490-771
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               502-771
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               551-773
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               121, 44
               

               Conread position:
               563-773
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               593-754
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               611-769
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               611-773
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               621-766
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               646-773
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 103
               

               Conread position:
               680-773
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               82
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 0
               
Show alignments to all cow chromosomes.