Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 25-773 |
| Cow position: | chr13:34937438-34938173 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 43-776 |
| Cow position: | chr13:43983110-43982387 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 48-422 |
| Cow position: | chr13:26844076-26844441 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 44 |
| Conread position: | 50-774 |
| Cow position: | chr13:20542071-20541336 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 57-773 |
| Cow position: | chr13:3654336-3653611 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 29 |
| Conread position: | 65-671 |
| Cow position: | chr13:35030541-35031143 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 80-773 |
| Cow position: | chr13:4483807-4484502 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 5 |
| Conread position: | 90-773 |
| Cow position: | chr13:6668100-6667425 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 512 |
| Conread position: | 93-380 |
| Cow position: | chr13:11064145-11063869 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 99-667 |
| Cow position: | chr13:35757271-35757848 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 99-773 |
| Cow position: | chr13:1593125-1592446 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr13:15924354-15923671 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr13:30238276-30238945 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr13:32737792-32737115 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 103-531 |
| Cow position: | chr13:27922200-27921767 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 105-248 |
| Cow position: | chr13:34693200-34693347 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 105-361 |
| Cow position: | chr13:22766058-22766318 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 225 |
| Conread position: | 105-773 |
| Cow position: | chr13:23003274-23002589 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 105-773 |
| Cow position: | chr13:30303311-30303992 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 149 |
| Conread position: | 106-266 |
| Cow position: | chr13:11799723-11799557 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 89 |
| Conread position: | 110-544 |
| Cow position: | chr13:34868782-34869227 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 211 |
| Conread position: | 117-771 |
| Cow position: | chr13:30244638-30243974 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 412 |
| Conread position: | 121-771 |
| Cow position: | chr13:60466380-60467033 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 127-771 |
| Cow position: | chr13:17308525-17309179 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 130-773 |
| Cow position: | chr13:34325505-34324851 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 380 |
| Conread position: | 162-773 |
| Cow position: | chr13:15451017-15450417 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 162-773 |
| Cow position: | chr13:15520406-15519798 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 30 |
| Conread position: | 168-773 |
| Cow position: | chr13:57023802-57024407 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 176-773 |
| Cow position: | chr13:31612201-31611598 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 337 |
| Conread position: | 176-773 |
| Cow position: | chr13:32545484-32546089 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 354 |
| Conread position: | 213-773 |
| Cow position: | chr13:13900010-13900577 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 354-773 |
| Cow position: | chr13:16255095-16254675 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 126 |
| Conread position: | 380-773 |
| Cow position: | chr13:30277938-30278326 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 391-773 |
| Cow position: | chr13:34029739-34030119 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 415-773 |
| Cow position: | chr13:60700309-60699951 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 459-772 |
| Cow position: | chr13:25692090-25692392 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 61, 132 |
| Conread position: | 465-771 |
| Cow position: | chr13:3056735-3056429 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 56, 136 |
| Conread position: | 466-771 |
| Cow position: | chr13:34910461-34910159 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 55 |
| Conread position: | 488-773 |
| Cow position: | chr13:4941813-4942093 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 33, 109 |
| Conread position: | 488-773 |
| Cow position: | chr13:33335886-33335607 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 517-771 |
| Cow position: | chr13:677473-677723 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 517-771 |
| Cow position: | chr13:34424215-34424468 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 520-773 |
| Cow position: | chr13:34765989-34765745 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 554-773 |
| Cow position: | chr13:31730382-31730166 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 118, 15 |
| Conread position: | 616-769 |
| Cow position: | chr13:48358258-48358412 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 631-771 |
| Cow position: | chr13:11798145-11798004 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 645-773 |
| Cow position: | chr13:35757852-35757981 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.