Cow genome map
Conread name: | Lng1-LNG010059B05 |
Conread position: | 10-773 |
Cow position: | chr14:33236846-33237608 (view UCSC Genome Browser custom track) |
Alignm length: | 789 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 40 |
Conread position: | 25-672 |
Cow position: | chr14:45303128-45302492 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 8 |
Conread position: | 35-773 |
Cow position: | chr14:44377648-44378381 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 544 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 40 |
Conread position: | 43-771 |
Cow position: | chr14:44257141-44256396 (view UCSC Genome Browser custom track) |
Alignm length: | 766 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 50 |
Conread position: | 93-773 |
Cow position: | chr14:38146894-38147591 (view UCSC Genome Browser custom track) |
Alignm length: | 722 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 103 |
Conread position: | 94-771 |
Cow position: | chr14:44776149-44775456 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 25 |
Conread position: | 98-720 |
Cow position: | chr14:30596479-30595848 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 7 |
Conread position: | 98-773 |
Cow position: | chr14:13864177-13863514 (view UCSC Genome Browser custom track) |
Alignm length: | 685 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 9 |
Conread position: | 99-673 |
Cow position: | chr14:41408789-41409348 (view UCSC Genome Browser custom track) |
Alignm length: | 591 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 151 |
Conread position: | 99-762 |
Cow position: | chr14:13778861-13779511 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-772 |
Cow position: | chr14:5528968-5529650 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr14:5511728-5512407 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr14:11154260-11153575 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr14:17685302-17685982 (view UCSC Genome Browser custom track) |
Alignm length: | 686 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr14:19328362-19327684 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr14:20782362-20783042 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 6 |
Conread position: | 101-249 |
Cow position: | chr14:5201174-5201023 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 115 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 102-343 |
Cow position: | chr14:14308648-14308406 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 171 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 74, 97 |
Conread position: | 103-771 |
Cow position: | chr14:16273388-16272715 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 121 |
Conread position: | 103-773 |
Cow position: | chr14:44226304-44226982 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 145 |
Conread position: | 105-234 |
Cow position: | chr14:13273158-13273289 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 105-275 |
Cow position: | chr14:19620131-19620304 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 137 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 105-538 |
Cow position: | chr14:44685954-44686396 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 105-586 |
Cow position: | chr14:50110477-50110972 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 105-773 |
Cow position: | chr14:44287339-44286668 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 35 |
Conread position: | 105-773 |
Cow position: | chr14:45080956-45081633 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 111 |
Conread position: | 110-443 |
Cow position: | chr14:17760984-17760653 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 237 |
Conread position: | 111-771 |
Cow position: | chr14:13621225-13620570 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 143 |
Conread position: | 117-299 |
Cow position: | chr14:13323948-13323766 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 55, 80 |
Conread position: | 117-771 |
Cow position: | chr14:9045482-9046156 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 485 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 414 |
Conread position: | 117-771 |
Cow position: | chr14:23257275-23257934 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 485 |
Conread position: | 121-773 |
Cow position: | chr14:17001134-17000476 (view UCSC Genome Browser custom track) |
Alignm length: | 667 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 16 |
Conread position: | 126-382 |
Cow position: | chr14:46465009-46465280 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 201 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 41, 128 |
Conread position: | 127-771 |
Cow position: | chr14:2284265-2284919 (view UCSC Genome Browser custom track) |
Alignm length: | 659 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 147 |
Conread position: | 137-771 |
Cow position: | chr14:750506-751147 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 117 |
Conread position: | 137-771 |
Cow position: | chr14:33393843-33393206 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 80 |
Conread position: | 157-773 |
Cow position: | chr14:12610419-12611033 (view UCSC Genome Browser custom track) |
Alignm length: | 636 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 68 |
Conread position: | 164-773 |
Cow position: | chr14:45206282-45206907 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 172 |
Conread position: | 166-593 |
Cow position: | chr14:29777530-29777091 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 257 |
Conread position: | 166-673 |
Cow position: | chr14:43557945-43558455 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 199, 67 |
Conread position: | 167-773 |
Cow position: | chr14:45189796-45189196 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 40 |
Conread position: | 168-773 |
Cow position: | chr14:48825269-48825866 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 454 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 279 |
Conread position: | 239-773 |
Cow position: | chr14:32446841-32447376 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 12 |
Conread position: | 250-773 |
Cow position: | chr14:15276174-15275649 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 54 |
Conread position: | 280-771 |
Cow position: | chr14:33401775-33402266 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 151 |
Conread position: | 312-773 |
Cow position: | chr14:190081-190550 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 288 |
Conread position: | 334-773 |
Cow position: | chr14:12899241-12899678 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 80 |
Conread position: | 338-771 |
Cow position: | chr14:50393889-50393475 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 295 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 132, 233 |
Conread position: | 343-771 |
Cow position: | chr14:16344003-16343568 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 264 |
Conread position: | 352-773 |
Cow position: | chr14:16919555-16919134 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 248 |
Conread position: | 380-773 |
Cow position: | chr14:17760677-17760297 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 48 |
Conread position: | 380-773 |
Cow position: | chr14:44288961-44288572 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 121 |
Conread position: | 385-773 |
Cow position: | chr14:35385876-35385490 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 194 |
Conread position: | 418-773 |
Cow position: | chr14:44131125-44131467 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 106 |
Conread position: | 433-773 |
Cow position: | chr14:2294515-2294857 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 235 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 34, 156 |
Conread position: | 441-773 |
Cow position: | chr14:44676372-44676698 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 228 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 20, 122 |
Conread position: | 446-727 |
Cow position: | chr14:48602071-48601790 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 200 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 74, 152 |
Conread position: | 458-773 |
Cow position: | chr14:11561747-11561447 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 222, 63 |
Conread position: | 468-773 |
Cow position: | chr14:45028730-45028419 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 208 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 129 |
Conread position: | 482-773 |
Cow position: | chr14:45711423-45711132 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 213 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 37, 117 |
Conread position: | 487-773 |
Cow position: | chr14:40341353-40341634 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 116 |
Conread position: | 488-774 |
Cow position: | chr14:47655606-47655888 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 192 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 30, 108 |
Conread position: | 489-773 |
Cow position: | chr14:35365951-35365675 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 197 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 31, 61 |
Conread position: | 497-773 |
Cow position: | chr14:37224498-37224774 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 196 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 24, 102 |
Conread position: | 507-771 |
Cow position: | chr14:38531138-38530878 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 191 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 12, 70 |
Conread position: | 517-773 |
Cow position: | chr14:46465652-46465903 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 183 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 24, 54 |
Conread position: | 541-773 |
Cow position: | chr14:33677416-33677646 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 173 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 22, 62 |
Conread position: | 558-755 |
Cow position: | chr14:29580548-29580740 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 566-757 |
Cow position: | chr14:13273981-13274170 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 142 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 23 |
Conread position: | 611-773 |
Cow position: | chr14:40169293-40169134 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 64, 109 |
Conread position: | 627-773 |
Cow position: | chr14:29775781-29775634 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.