Cow genome map

Conread name: Lng1-LNG010059B05

Conread position: 10-773
Cow position: chr14:33236846-33237608 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 40

Conread position: 25-672
Cow position: chr14:45303128-45302492 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 35-773
Cow position: chr14:44377648-44378381 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 40

Conread position: 43-771
Cow position: chr14:44257141-44256396 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 50

Conread position: 93-773
Cow position: chr14:38146894-38147591 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 103

Conread position: 94-771
Cow position: chr14:44776149-44775456 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 25

Conread position: 98-720
Cow position: chr14:30596479-30595848 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 7

Conread position: 98-773
Cow position: chr14:13864177-13863514 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 9

Conread position: 99-673
Cow position: chr14:41408789-41409348 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 151

Conread position: 99-762
Cow position: chr14:13778861-13779511 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-772
Cow position: chr14:5528968-5529650 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr14:5511728-5512407 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr14:11154260-11153575 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr14:17685302-17685982 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr14:19328362-19327684 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 23

Conread position: 99-773
Cow position: chr14:20782362-20783042 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 6

Conread position: 101-249
Cow position: chr14:5201174-5201023 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 102-343
Cow position: chr14:14308648-14308406 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 97

Conread position: 103-771
Cow position: chr14:16273388-16272715 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 121

Conread position: 103-773
Cow position: chr14:44226304-44226982 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 145

Conread position: 105-234
Cow position: chr14:13273158-13273289 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 105-275
Cow position: chr14:19620131-19620304 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 105-538
Cow position: chr14:44685954-44686396 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 105-586
Cow position: chr14:50110477-50110972 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 105-773
Cow position: chr14:44287339-44286668 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 35

Conread position: 105-773
Cow position: chr14:45080956-45081633 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 111

Conread position: 110-443
Cow position: chr14:17760984-17760653 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 237

Conread position: 111-771
Cow position: chr14:13621225-13620570 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 143

Conread position: 117-299
Cow position: chr14:13323948-13323766 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 55, 80

Conread position: 117-771
Cow position: chr14:9045482-9046156 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 414

Conread position: 117-771
Cow position: chr14:23257275-23257934 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 485

Conread position: 121-773
Cow position: chr14:17001134-17000476 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 126-382
Cow position: chr14:46465009-46465280 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 128

Conread position: 127-771
Cow position: chr14:2284265-2284919 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 147

Conread position: 137-771
Cow position: chr14:750506-751147 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 117

Conread position: 137-771
Cow position: chr14:33393843-33393206 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 157-773
Cow position: chr14:12610419-12611033 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 68

Conread position: 164-773
Cow position: chr14:45206282-45206907 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 172

Conread position: 166-593
Cow position: chr14:29777530-29777091 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 257

Conread position: 166-673
Cow position: chr14:43557945-43558455 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 67

Conread position: 167-773
Cow position: chr14:45189796-45189196 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 40

Conread position: 168-773
Cow position: chr14:48825269-48825866 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 279

Conread position: 239-773
Cow position: chr14:32446841-32447376 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 12

Conread position: 250-773
Cow position: chr14:15276174-15275649 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 54

Conread position: 280-771
Cow position: chr14:33401775-33402266 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 151

Conread position: 312-773
Cow position: chr14:190081-190550 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 288

Conread position: 334-773
Cow position: chr14:12899241-12899678 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 338-771
Cow position: chr14:50393889-50393475 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 295
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 132, 233

Conread position: 343-771
Cow position: chr14:16344003-16343568 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 264

Conread position: 352-773
Cow position: chr14:16919555-16919134 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 248

Conread position: 380-773
Cow position: chr14:17760677-17760297 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 48

Conread position: 380-773
Cow position: chr14:44288961-44288572 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 121

Conread position: 385-773
Cow position: chr14:35385876-35385490 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 194

Conread position: 418-773
Cow position: chr14:44131125-44131467 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 106

Conread position: 433-773
Cow position: chr14:2294515-2294857 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 34, 156

Conread position: 441-773
Cow position: chr14:44676372-44676698 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 122

Conread position: 446-727
Cow position: chr14:48602071-48601790 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 152

Conread position: 458-773
Cow position: chr14:11561747-11561447 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 222, 63

Conread position: 468-773
Cow position: chr14:45028730-45028419 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 129

Conread position: 482-773
Cow position: chr14:45711423-45711132 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 117

Conread position: 487-773
Cow position: chr14:40341353-40341634 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 116

Conread position: 488-774
Cow position: chr14:47655606-47655888 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 30, 108

Conread position: 489-773
Cow position: chr14:35365951-35365675 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 61

Conread position: 497-773
Cow position: chr14:37224498-37224774 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 24, 102

Conread position: 507-771
Cow position: chr14:38531138-38530878 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 70

Conread position: 517-773
Cow position: chr14:46465652-46465903 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 54

Conread position: 541-773
Cow position: chr14:33677416-33677646 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 62

Conread position: 558-755
Cow position: chr14:29580548-29580740 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 16

Conread position: 566-757
Cow position: chr14:13273981-13274170 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 23

Conread position: 611-773
Cow position: chr14:40169293-40169134 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 109

Conread position: 627-773
Cow position: chr14:29775781-29775634 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.