Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               10-773
               

               Cow position:
               
               

               Alignm length:
               789
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 40
               

               Conread position:
               25-672
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               35-773
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               43-771
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               93-773
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 103
               

               Conread position:
               94-771
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 25
               

               Conread position:
               98-720
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               99-673
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 151
               

               Conread position:
               99-762
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-772
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 6
               

               Conread position:
               101-249
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               102-343
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               74, 97
               

               Conread position:
               103-771
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 121
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 145
               

               Conread position:
               105-234
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-275
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-538
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-586
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               110-443
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 237
               

               Conread position:
               111-771
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 143
               

               Conread position:
               117-299
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 414
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 485
               

               Conread position:
               121-773
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               126-382
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 147
               

               Conread position:
               137-771
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               137-771
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               157-773
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               164-773
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 172
               

               Conread position:
               166-593
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 257
               

               Conread position:
               166-673
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 67
               

               Conread position:
               167-773
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               168-773
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 279
               

               Conread position:
               239-773
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 12
               

               Conread position:
               250-773
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 54
               

               Conread position:
               280-771
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 151
               

               Conread position:
               312-773
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 288
               

               Conread position:
               334-773
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 80
               

               Conread position:
               338-771
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               132, 233
               

               Conread position:
               343-771
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 264
               

               Conread position:
               352-773
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 248
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 48
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 121
               

               Conread position:
               385-773
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 194
               

               Conread position:
               418-773
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 106
               

               Conread position:
               433-773
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               235
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               34, 156
               

               Conread position:
               441-773
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 122
               

               Conread position:
               446-727
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               74, 152
               

               Conread position:
               458-773
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               222, 63
               

               Conread position:
               468-773
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               482-773
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               487-773
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               488-774
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               30, 108
               

               Conread position:
               489-773
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               497-773
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               507-771
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               517-773
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               541-773
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               558-755
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               566-757
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               611-773
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 109
               

               Conread position:
               627-773
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.