Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 25-485 |
| Cow position: | chr16:42739617-42739154 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 36-492 |
| Cow position: | chr16:49235331-49234869 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 48-773 |
| Cow position: | chr16:29033550-29034290 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 49-365 |
| Cow position: | chr16:5890028-5890339 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 49-412 |
| Cow position: | chr16:25156380-25155998 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 49-765 |
| Cow position: | chr16:25257439-25258180 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 66-760 |
| Cow position: | chr16:23807940-23808662 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 93-751 |
| Cow position: | chr16:47563960-47564583 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 440 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 113 |
| Conread position: | 97-664 |
| Cow position: | chr16:9930494-9931065 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 21 |
| Conread position: | 98-465 |
| Cow position: | chr16:2239181-2238827 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 6 |
| Conread position: | 98-771 |
| Cow position: | chr16:34529880-34530553 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 98-773 |
| Cow position: | chr16:31592348-31591677 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 7 |
| Conread position: | 99-768 |
| Cow position: | chr16:25441184-25441864 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 99-768 |
| Cow position: | chr16:25457905-25457226 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 99-773 |
| Cow position: | chr16:407471-406797 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr16:1567894-1567210 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr16:2727728-2727046 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr16:10437801-10438494 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr16:12538365-12537685 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr16:25341525-25342211 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 99-773 |
| Cow position: | chr16:26663309-26663992 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 99-773 |
| Cow position: | chr16:27734232-27733556 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 99-773 |
| Cow position: | chr16:28471542-28470859 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr16:40296618-40295934 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-773 |
| Cow position: | chr16:23982871-23983539 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 103-759 |
| Cow position: | chr16:29046584-29047248 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 209 |
| Conread position: | 103-773 |
| Cow position: | chr16:8816542-8815864 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 105-773 |
| Cow position: | chr16:2483577-2482897 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 106-773 |
| Cow position: | chr16:2411401-2410724 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 113-771 |
| Cow position: | chr16:25085214-25085856 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 181 |
| Conread position: | 117-771 |
| Cow position: | chr16:5661420-5662082 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 119-771 |
| Cow position: | chr16:4302761-4302101 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 186 |
| Conread position: | 120-771 |
| Cow position: | chr16:45798155-45798803 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 140 |
| Conread position: | 127-771 |
| Cow position: | chr16:25188221-25188888 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 163-773 |
| Cow position: | chr16:14666188-14665568 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 366 |
| Conread position: | 210-773 |
| Cow position: | chr16:4479312-4478741 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 396 |
| Conread position: | 218-771 |
| Cow position: | chr16:28197998-28197437 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 232-773 |
| Cow position: | chr16:15476537-15477083 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 205 |
| Conread position: | 241-773 |
| Cow position: | chr16:49256488-49255979 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 252-773 |
| Cow position: | chr16:30049211-30049730 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 22 |
| Conread position: | 258-773 |
| Cow position: | chr16:1431906-1432427 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 280 |
| Conread position: | 380-771 |
| Cow position: | chr16:21185464-21185854 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 380-773 |
| Cow position: | chr16:41166919-41166528 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 381-674 |
| Cow position: | chr16:26374441-26374731 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 381-773 |
| Cow position: | chr16:52592249-52591866 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 80, 5 |
| Conread position: | 385-773 |
| Cow position: | chr16:23536035-23535649 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 24 |
| Conread position: | 418-774 |
| Cow position: | chr16:18498403-18498045 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 482-773 |
| Cow position: | chr16:16271188-16270898 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 116 |
| Conread position: | 488-773 |
| Cow position: | chr16:5484693-5484973 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 489-771 |
| Cow position: | chr16:25255426-25255705 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 489-773 |
| Cow position: | chr16:15185034-15185314 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 52, 32 |
| Conread position: | 507-773 |
| Cow position: | chr16:42736416-42736159 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 517-721 |
| Cow position: | chr16:15567022-15567225 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 517-773 |
| Cow position: | chr16:23252446-23252192 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 6 |
| Conread position: | 526-773 |
| Cow position: | chr16:15493499-15493745 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 72 |
| Conread position: | 529-771 |
| Cow position: | chr16:51405936-51405711 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 537-756 |
| Cow position: | chr16:7463679-7463896 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 537-773 |
| Cow position: | chr16:20201925-20202158 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 143, 59 |
| Conread position: | 554-771 |
| Cow position: | chr16:4305237-4305024 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 45 |
| Conread position: | 597-773 |
| Cow position: | chr16:49221862-49221690 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 617-773 |
| Cow position: | chr16:1860307-1860464 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.