Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               25-485
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 8
               

               Conread position:
               36-492
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               48-773
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               49-365
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               49-412
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 6
               

               Conread position:
               49-765
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               66-760
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               93-751
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               440
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               97-664
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               98-465
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 6
               

               Conread position:
               98-771
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               99-768
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               99-768
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               103-759
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 209
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 102
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 31
               

               Conread position:
               113-771
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 181
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 186
               

               Conread position:
               120-771
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 39
               

               Conread position:
               163-773
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 366
               

               Conread position:
               210-773
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 396
               

               Conread position:
               218-771
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               232-773
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 205
               

               Conread position:
               241-773
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 10
               

               Conread position:
               252-773
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 22
               

               Conread position:
               258-773
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 280
               

               Conread position:
               380-771
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 22
               

               Conread position:
               381-674
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               381-773
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               80, 5
               

               Conread position:
               385-773
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               418-774
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               482-773
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               489-771
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 109
               

               Conread position:
               489-773
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               507-773
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               517-721
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 79
               

               Conread position:
               517-773
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               24, 6
               

               Conread position:
               526-773
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               529-771
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               537-756
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 60
               

               Conread position:
               537-773
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               143, 59
               

               Conread position:
               554-771
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               597-773
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               617-773
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.