Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 44-771 |
| Cow position: | chr17:1657761-1657041 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 93-430 |
| Cow position: | chr17:42265053-42265395 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 99-771 |
| Cow position: | chr17:14894291-14894973 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr17:2579753-2580432 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 99-773 |
| Cow position: | chr17:3642698-3642021 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr17:6259982-6260671 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr17:11087586-11086908 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr17:16857395-16856704 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 99-773 |
| Cow position: | chr17:18103547-18102876 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr17:40804955-40805623 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-773 |
| Cow position: | chr17:19019711-19020386 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 105-247 |
| Cow position: | chr17:20073103-20072957 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 105-737 |
| Cow position: | chr17:22132371-22133004 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 357 |
| Conread position: | 105-773 |
| Cow position: | chr17:24029857-24029190 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 108-245 |
| Cow position: | chr17:6001267-6001129 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 125 |
| Conread position: | 113-773 |
| Cow position: | chr17:14040880-14040226 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 115-773 |
| Cow position: | chr17:6068712-6069368 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 116-771 |
| Cow position: | chr17:15156817-15156157 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 116-773 |
| Cow position: | chr17:20087590-20086938 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 119-771 |
| Cow position: | chr17:14216878-14216223 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 190 |
| Conread position: | 126-773 |
| Cow position: | chr17:1880255-1880911 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 127-771 |
| Cow position: | chr17:2262260-2262917 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 486 |
| Conread position: | 127-771 |
| Cow position: | chr17:31767881-31767229 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 480 |
| Conread position: | 127-771 |
| Cow position: | chr17:34156286-34156930 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 339 |
| Conread position: | 166-773 |
| Cow position: | chr17:5226822-5227427 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 204 |
| Conread position: | 166-773 |
| Cow position: | chr17:15324027-15324643 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 440 |
| Conread position: | 167-594 |
| Cow position: | chr17:151671-151236 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 175-774 |
| Cow position: | chr17:38873830-38874443 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 380 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 215-765 |
| Cow position: | chr17:20402659-20403224 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 279-763 |
| Cow position: | chr17:6001132-6000642 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 297-771 |
| Cow position: | chr17:43988831-43989310 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 304 |
| Conread position: | 323-728 |
| Cow position: | chr17:28018767-28019158 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 197, 59 |
| Conread position: | 352-773 |
| Cow position: | chr17:16899915-16899495 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 295 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 212 |
| Conread position: | 380-589 |
| Cow position: | chr17:14238881-14239094 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 383-750 |
| Cow position: | chr17:20081435-20081076 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 91 |
| Conread position: | 385-773 |
| Cow position: | chr17:19268407-19268015 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 400-687 |
| Cow position: | chr17:15371399-15371693 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 64, 211 |
| Conread position: | 405-773 |
| Cow position: | chr17:4942286-4941916 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 65, 197 |
| Conread position: | 414-773 |
| Cow position: | chr17:20100021-20099663 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 57 |
| Conread position: | 488-773 |
| Cow position: | chr17:15851221-15851503 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 33, 110 |
| Conread position: | 497-720 |
| Cow position: | chr17:2174379-2174601 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 555-754 |
| Cow position: | chr17:22558586-22558781 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 598-762 |
| Cow position: | chr17:14307215-14307049 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 616-773 |
| Cow position: | chr17:54798-54640 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 619-773 |
| Cow position: | chr17:1787280-1787123 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 619-773 |
| Cow position: | chr17:14240159-14240312 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 11 |
Show alignments to all cow chromosomes.