Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 5-771 |
| Cow position: | chr20:18315114-18314365 (view UCSC Genome Browser custom track) |
| Alignm length: | 792 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 196 |
| Conread position: | 48-763 |
| Cow position: | chr20:10855090-10854381 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 49-773 |
| Cow position: | chr20:8215753-8216500 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 54-589 |
| Cow position: | chr20:5230472-5229917 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 359 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 99-523 |
| Cow position: | chr20:28161077-28161512 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 22 |
| Conread position: | 99-771 |
| Cow position: | chr20:27869504-27870188 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr20:5535244-5535921 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr20:15097570-15096894 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr20:21914634-21915305 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 99-773 |
| Cow position: | chr20:23799192-23799870 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr20:28565289-28564603 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr20:29948805-29949490 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 99-773 |
| Cow position: | chr20:30684627-30685305 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-773 |
| Cow position: | chr20:35124804-35125480 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 102-301 |
| Cow position: | chr20:42076752-42076554 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 105-277 |
| Cow position: | chr20:10845810-10845633 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 106-489 |
| Cow position: | chr20:8003911-8003522 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 106-767 |
| Cow position: | chr20:13763219-13763885 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 106-773 |
| Cow position: | chr20:23469351-23468676 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 116-762 |
| Cow position: | chr20:13679723-13679073 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 219 |
| Conread position: | 117-771 |
| Cow position: | chr20:823084-823743 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 318 |
| Conread position: | 118-402 |
| Cow position: | chr20:7085350-7085068 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 153 |
| Conread position: | 119-771 |
| Cow position: | chr20:38350995-38351658 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 142-773 |
| Cow position: | chr20:42905561-42906184 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 80 |
| Conread position: | 179-735 |
| Cow position: | chr20:22697656-22698211 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 240-773 |
| Cow position: | chr20:12568968-12569507 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 359 |
| Conread position: | 254-772 |
| Cow position: | chr20:14870486-14869964 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 136 |
| Conread position: | 288-773 |
| Cow position: | chr20:24616363-24615882 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 103 |
| Conread position: | 298-773 |
| Cow position: | chr20:13434081-13433613 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 120 |
| Conread position: | 313-773 |
| Cow position: | chr20:17661557-17661087 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 294 |
| Conread position: | 337-647 |
| Cow position: | chr20:13664903-13664584 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 221 |
| Conread position: | 381-777 |
| Cow position: | chr20:37442713-37442306 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 146 |
| Conread position: | 382-773 |
| Cow position: | chr20:37580805-37581204 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 152 |
| Conread position: | 391-773 |
| Cow position: | chr20:7113586-7113205 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 209 |
| Conread position: | 423-777 |
| Cow position: | chr20:22207755-22208113 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 179 |
| Conread position: | 469-773 |
| Cow position: | chr20:10102013-10101719 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 49, 100 |
| Conread position: | 488-750 |
| Cow position: | chr20:25850126-25849864 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 493-773 |
| Cow position: | chr20:28161526-28161806 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 527-760 |
| Cow position: | chr20:7083665-7083434 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 551-762 |
| Cow position: | chr20:16178968-16178768 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 551-773 |
| Cow position: | chr20:12437940-12437723 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 121, 44 |
| Conread position: | 611-773 |
| Cow position: | chr20:872138-871981 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.