Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 7-773 |
| Cow position: | chr21:29398-30178 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 327 |
| Conread position: | 23-548 |
| Cow position: | chr21:23812508-23813057 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 24-163 |
| Cow position: | chr21:9870410-9870546 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 48-658 |
| Cow position: | chr21:2710876-2711475 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 49-670 |
| Cow position: | chr21:23861688-23862318 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 50-499 |
| Cow position: | chr21:27565759-27566235 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 55-266 |
| Cow position: | chr21:6109932-6110151 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 38, 205 |
| Conread position: | 66-773 |
| Cow position: | chr21:21915081-21915782 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 97-465 |
| Cow position: | chr21:7267115-7266740 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 313 |
| Conread position: | 97-769 |
| Cow position: | chr21:4077261-4077930 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 8 |
| Conread position: | 99-773 |
| Cow position: | chr21:2883323-2882637 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 99-773 |
| Cow position: | chr21:3779192-3779868 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr21:10567094-10567771 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr21:10850503-10851180 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 99-773 |
| Cow position: | chr21:35144182-35144858 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr21:40271255-40270574 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr21:48116527-48117199 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 100-510 |
| Cow position: | chr21:21925899-21925487 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 211 |
| Conread position: | 101-482 |
| Cow position: | chr21:359794-360166 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 103-315 |
| Cow position: | chr21:2674184-2673971 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 105-239 |
| Cow position: | chr21:2502321-2502458 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 116-773 |
| Cow position: | chr21:146365-147030 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 116-773 |
| Cow position: | chr21:2416654-2417317 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 93 |
| Conread position: | 117-770 |
| Cow position: | chr21:37371681-37372335 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 366 |
| Conread position: | 121-673 |
| Cow position: | chr21:28735676-28736251 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 209 |
| Conread position: | 121-773 |
| Cow position: | chr21:467336-467969 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 127-771 |
| Cow position: | chr21:11453210-11452558 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 169 |
| Conread position: | 130-690 |
| Cow position: | chr21:4093950-4094522 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 133-757 |
| Cow position: | chr21:13313224-13313844 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 267 |
| Conread position: | 163-706 |
| Cow position: | chr21:47949550-47950095 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 167-773 |
| Cow position: | chr21:37148526-37149136 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 168-773 |
| Cow position: | chr21:1287729-1287117 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 169-773 |
| Cow position: | chr21:47941349-47941959 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 174-773 |
| Cow position: | chr21:21944238-21943663 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 55 |
| Conread position: | 182-773 |
| Cow position: | chr21:39087512-39088103 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 41 |
| Conread position: | 185-773 |
| Cow position: | chr21:1192264-1192858 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 421 |
| Conread position: | 301-773 |
| Cow position: | chr21:18817937-18817451 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 128 |
| Conread position: | 314-773 |
| Cow position: | chr21:4184542-4185005 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 279 |
| Conread position: | 338-773 |
| Cow position: | chr21:5840606-5840163 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 269 |
| Conread position: | 340-774 |
| Cow position: | chr21:5015631-5015206 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 137 |
| Conread position: | 360-748 |
| Cow position: | chr21:27149594-27149987 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 248 |
| Conread position: | 376-750 |
| Cow position: | chr21:217756-218129 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 405-773 |
| Cow position: | chr21:37719286-37718919 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 415-773 |
| Cow position: | chr21:28256170-28256534 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 437-726 |
| Cow position: | chr21:26743416-26743133 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 238, 84 |
| Conread position: | 441-774 |
| Cow position: | chr21:20743807-20743478 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 81 |
| Conread position: | 480-773 |
| Cow position: | chr21:49295415-49295708 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 488-773 |
| Cow position: | chr21:26402672-26402387 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 111 |
| Conread position: | 488-773 |
| Cow position: | chr21:27070151-27069867 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 488-773 |
| Cow position: | chr21:33252993-33253283 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 33, 109 |
| Conread position: | 489-773 |
| Cow position: | chr21:27566464-27566739 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 496-771 |
| Cow position: | chr21:360467-360742 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 496-773 |
| Cow position: | chr21:1689334-1689060 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 502-671 |
| Cow position: | chr21:7591124-7591291 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 96 |
| Conread position: | 517-773 |
| Cow position: | chr21:31515479-31515227 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 608-773 |
| Cow position: | chr21:9892826-9892991 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 98 |
Show alignments to all cow chromosomes.