Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 7-440 |
| Cow position: | chr22:13917964-13918432 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 104 |
| Conread position: | 25-650 |
| Cow position: | chr22:35907224-35906598 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 36-773 |
| Cow position: | chr22:6502958-6502217 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 43-689 |
| Cow position: | chr22:23853852-23854490 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 46-247 |
| Cow position: | chr22:44610103-44610298 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 49-382 |
| Cow position: | chr22:1322321-1322659 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 50-773 |
| Cow position: | chr22:11031951-11032675 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 42 |
| Conread position: | 52-485 |
| Cow position: | chr22:3306206-3305759 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 57-546 |
| Cow position: | chr22:17328526-17328029 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 27 |
| Conread position: | 93-777 |
| Cow position: | chr22:36184002-36184689 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 128 |
| Conread position: | 95-492 |
| Cow position: | chr22:46630802-46630394 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 212 |
| Conread position: | 98-241 |
| Cow position: | chr22:1860991-1861136 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 7 |
| Conread position: | 99-757 |
| Cow position: | chr22:36861277-36860620 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-771 |
| Cow position: | chr22:19143446-19142763 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr22:21589577-21590266 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 99-773 |
| Cow position: | chr22:31313592-31314275 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr22:31334785-31334107 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr22:34168584-34169267 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr22:39469270-39468592 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr22:42991425-42992104 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-774 |
| Cow position: | chr22:34599659-34600310 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 15 |
| Conread position: | 102-773 |
| Cow position: | chr22:37072824-37072156 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 134 |
| Conread position: | 103-273 |
| Cow position: | chr22:1522266-1522439 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 103-773 |
| Cow position: | chr22:18816131-18815452 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 104-774 |
| Cow position: | chr22:326914-326240 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 140 |
| Conread position: | 105-221 |
| Cow position: | chr22:46853600-46853718 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 115-340 |
| Cow position: | chr22:15851581-15851810 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 9, 219 |
| Conread position: | 116-771 |
| Cow position: | chr22:44369363-44368691 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 98 |
| Conread position: | 117-592 |
| Cow position: | chr22:5308370-5308848 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 321 |
| Conread position: | 119-771 |
| Cow position: | chr22:20240579-20239915 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 99 |
| Conread position: | 121-574 |
| Cow position: | chr22:48004807-48005272 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 142 |
| Conread position: | 122-773 |
| Cow position: | chr22:1520740-1520095 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 127-771 |
| Cow position: | chr22:3278083-3277433 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 200 |
| Conread position: | 129-769 |
| Cow position: | chr22:5233007-5232367 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 484 |
| Conread position: | 142-773 |
| Cow position: | chr22:24536044-24536657 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 227-772 |
| Cow position: | chr22:8135732-8135190 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 24 |
| Conread position: | 232-771 |
| Cow position: | chr22:14629798-14630345 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 376 |
| Conread position: | 276-774 |
| Cow position: | chr22:44457480-44457983 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 278 |
| Conread position: | 283-765 |
| Cow position: | chr22:2395561-2395073 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 21 |
| Conread position: | 336-773 |
| Cow position: | chr22:45930167-45930602 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 33, 96 |
| Conread position: | 360-773 |
| Cow position: | chr22:41239885-41240303 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 375-670 |
| Cow position: | chr22:9287116-9287410 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 100, 188 |
| Conread position: | 380-771 |
| Cow position: | chr22:11804524-11804129 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 223 |
| Conread position: | 387-745 |
| Cow position: | chr22:36129454-36129815 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 211 |
| Conread position: | 419-673 |
| Cow position: | chr22:36276075-36276324 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 48 |
| Conread position: | 421-773 |
| Cow position: | chr22:522819-522466 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 425-774 |
| Cow position: | chr22:6332297-6332639 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 177 |
| Conread position: | 427-773 |
| Cow position: | chr22:3802777-3803117 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 50 |
| Conread position: | 432-750 |
| Cow position: | chr22:6142792-6142477 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 98 |
| Conread position: | 490-773 |
| Cow position: | chr22:44351016-44350734 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 496-773 |
| Cow position: | chr22:37293018-37292737 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 510-773 |
| Cow position: | chr22:28659694-28659432 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 527-765 |
| Cow position: | chr22:19586207-19585971 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 528-773 |
| Cow position: | chr22:17327770-17327526 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 562-756 |
| Cow position: | chr22:37140627-37140811 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 618-773 |
| Cow position: | chr22:1281958-1281802 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.