Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 43-771 |
| Cow position: | chr23:16615246-16614510 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 49-497 |
| Cow position: | chr23:7046465-7045990 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 93-773 |
| Cow position: | chr23:20155966-20155290 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 5 |
| Conread position: | 96-446 |
| Cow position: | chr23:4434701-4435057 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 98-512 |
| Cow position: | chr23:16616594-16616171 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 7 |
| Conread position: | 98-773 |
| Cow position: | chr23:36031125-36030449 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 99-773 |
| Cow position: | chr23:2716641-2717319 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 317 |
| Conread position: | 99-773 |
| Cow position: | chr23:4640371-4639696 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr23:4888926-4889612 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 100-472 |
| Cow position: | chr23:25683787-25683428 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 100-556 |
| Cow position: | chr23:2781961-2781501 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 214 |
| Conread position: | 100-583 |
| Cow position: | chr23:5874387-5873912 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 36 |
| Conread position: | 100-771 |
| Cow position: | chr23:4510331-4510984 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 103-767 |
| Cow position: | chr23:27399758-27400430 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 103-773 |
| Cow position: | chr23:19489797-19490464 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 312 |
| Conread position: | 105-380 |
| Cow position: | chr23:22146996-22146718 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 105-773 |
| Cow position: | chr23:29452060-29451412 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 143 |
| Conread position: | 106-773 |
| Cow position: | chr23:28913654-28914323 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 115-773 |
| Cow position: | chr23:15177338-15178001 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 115-773 |
| Cow position: | chr23:15219629-15218974 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 137-698 |
| Cow position: | chr23:23830249-23830815 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 93 |
| Conread position: | 215-748 |
| Cow position: | chr23:28108025-28108555 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 215-749 |
| Cow position: | chr23:28025032-28025574 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 370 |
| Conread position: | 232-747 |
| Cow position: | chr23:27970921-27971443 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 352 |
| Conread position: | 304-771 |
| Cow position: | chr23:3880622-3880155 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 273 |
| Conread position: | 315-769 |
| Cow position: | chr23:3706586-3707045 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 322-773 |
| Cow position: | chr23:2026610-2026153 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 284 |
| Conread position: | 345-590 |
| Cow position: | chr23:2575462-2575699 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 378-773 |
| Cow position: | chr23:11077679-11077279 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 99, 70 |
| Conread position: | 421-771 |
| Cow position: | chr23:11779361-11779710 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 177 |
| Conread position: | 428-773 |
| Cow position: | chr23:22146714-22146372 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 170 |
| Conread position: | 434-773 |
| Cow position: | chr23:15526155-15526497 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 168 |
| Conread position: | 468-696 |
| Cow position: | chr23:31594463-31594237 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 51, 130 |
| Conread position: | 504-773 |
| Cow position: | chr23:14778500-14778238 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 507-773 |
| Cow position: | chr23:16498564-16498303 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 527-773 |
| Cow position: | chr23:25683252-25683007 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 11, 67 |
| Conread position: | 552-773 |
| Cow position: | chr23:2781259-2781038 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 120, 53 |
| Conread position: | 559-773 |
| Cow position: | chr23:965780-965567 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 599-762 |
| Cow position: | chr23:15041993-15041828 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 614-773 |
| Cow position: | chr23:5873810-5873650 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 617-773 |
| Cow position: | chr23:2576197-2576353 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 55, 110 |
| Conread position: | 657-773 |
| Cow position: | chr23:8286842-8286959 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.