Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 25-773 |
| Cow position: | chr24:12206054-12205293 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 35-773 |
| Cow position: | chr24:36559498-36558758 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 49-773 |
| Cow position: | chr24:38637822-38638553 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 93-382 |
| Cow position: | chr24:12232643-12232364 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 74, 178 |
| Conread position: | 99-773 |
| Cow position: | chr24:148280-147595 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr24:12335436-12334744 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 99-773 |
| Cow position: | chr24:19833724-19834409 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr24:29187622-29188305 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-315 |
| Cow position: | chr24:37217347-37217564 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 24, 168 |
| Conread position: | 100-773 |
| Cow position: | chr24:17696638-17695968 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 101-498 |
| Cow position: | chr24:12130634-12130233 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 103-773 |
| Cow position: | chr24:4415188-4414518 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 103-773 |
| Cow position: | chr24:22971431-22972105 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 105-773 |
| Cow position: | chr24:33933710-33934387 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 500 |
| Conread position: | 106-773 |
| Cow position: | chr24:12086545-12087217 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 117-771 |
| Cow position: | chr24:43814113-43814776 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 145 |
| Conread position: | 119-771 |
| Cow position: | chr24:9188383-9187720 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 191 |
| Conread position: | 121-771 |
| Cow position: | chr24:29305972-29305308 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 493 |
| Conread position: | 127-771 |
| Cow position: | chr24:13188532-13189184 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 310 |
| Conread position: | 165-773 |
| Cow position: | chr24:6660096-6659480 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 444 |
| Conread position: | 173-589 |
| Cow position: | chr24:14754594-14754165 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 232-771 |
| Cow position: | chr24:12110224-12109693 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 19 |
| Conread position: | 243-763 |
| Cow position: | chr24:6059376-6059900 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 244-756 |
| Cow position: | chr24:9544542-9545062 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 355 |
| Conread position: | 262-773 |
| Cow position: | chr24:19702003-19702499 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 51 |
| Conread position: | 263-773 |
| Cow position: | chr24:14301994-14302493 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 193, 41 |
| Conread position: | 272-771 |
| Cow position: | chr24:12700312-12699804 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 330 |
| Conread position: | 297-773 |
| Cow position: | chr24:6065182-6064710 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 23 |
| Conread position: | 313-638 |
| Cow position: | chr24:6145957-6146277 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 341-771 |
| Cow position: | chr24:6435052-6435491 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 269 |
| Conread position: | 380-585 |
| Cow position: | chr24:37064371-37064170 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 383-773 |
| Cow position: | chr24:7090343-7089954 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 413-773 |
| Cow position: | chr24:14383934-14383578 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 458-769 |
| Cow position: | chr24:40655751-40656061 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 479-773 |
| Cow position: | chr24:12129343-12129053 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 485-773 |
| Cow position: | chr24:6406756-6407044 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 496-748 |
| Cow position: | chr24:6337122-6337375 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 501-773 |
| Cow position: | chr24:40193258-40193527 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 504-773 |
| Cow position: | chr24:6332951-6332680 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 555-771 |
| Cow position: | chr24:29182949-29183163 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 611-771 |
| Cow position: | chr24:11866397-11866236 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.