Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 44-771 |
| Cow position: | chr29:5982502-5981776 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 45-773 |
| Cow position: | chr29:31024568-31023848 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 468 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 85 |
| Conread position: | 49-671 |
| Cow position: | chr29:3177372-3176762 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 49-773 |
| Cow position: | chr29:14085920-14085188 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 22 |
| Conread position: | 93-482 |
| Cow position: | chr29:802670-802281 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 99-742 |
| Cow position: | chr29:16022793-16023448 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-749 |
| Cow position: | chr29:10823706-10823057 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-768 |
| Cow position: | chr29:20251422-20252100 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr29:2100108-2100788 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr29:2690163-2690852 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr29:7430956-7430278 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr29:26164559-26163889 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr29:38227243-38227918 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 99-773 |
| Cow position: | chr29:40502719-40502040 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 9 |
| Conread position: | 101-773 |
| Cow position: | chr29:39079447-39078765 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 103-761 |
| Cow position: | chr29:45459981-45460652 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 507 |
| Conread position: | 103-773 |
| Cow position: | chr29:25932279-25931600 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 237 |
| Conread position: | 104-223 |
| Cow position: | chr29:16770389-16770509 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 98 |
| Conread position: | 105-359 |
| Cow position: | chr29:42650533-42650791 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 105-465 |
| Cow position: | chr29:42802393-42802761 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 320 |
| Conread position: | 105-774 |
| Cow position: | chr29:21426762-21426086 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 436 |
| Conread position: | 106-382 |
| Cow position: | chr29:6266230-6265952 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 106-768 |
| Cow position: | chr29:43322825-43323493 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 106-773 |
| Cow position: | chr29:10647980-10647309 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 115-773 |
| Cow position: | chr29:2841096-2840437 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 117-771 |
| Cow position: | chr29:669784-669120 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 211 |
| Conread position: | 117-773 |
| Cow position: | chr29:4634119-4633462 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 134 |
| Conread position: | 127-771 |
| Cow position: | chr29:31181698-31182342 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 100 |
| Conread position: | 137-771 |
| Cow position: | chr29:27250049-27249405 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 137-771 |
| Cow position: | chr29:34925772-34926416 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 177 |
| Conread position: | 272-771 |
| Cow position: | chr29:32559324-32558815 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 338 |
| Conread position: | 396-771 |
| Cow position: | chr29:6265714-6265336 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 204 |
| Conread position: | 415-773 |
| Cow position: | chr29:8664104-8664451 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 147 |
| Conread position: | 454-648 |
| Cow position: | chr29:16344861-16345054 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 143 |
| Conread position: | 461-773 |
| Cow position: | chr29:14216598-14216906 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 462-773 |
| Cow position: | chr29:14210938-14210628 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 124 |
| Conread position: | 484-771 |
| Cow position: | chr29:7845033-7845320 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 116 |
| Conread position: | 496-773 |
| Cow position: | chr29:23976786-23977061 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 497-697 |
| Cow position: | chr29:2748587-2748388 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 504-773 |
| Cow position: | chr29:32286873-32287136 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 511-773 |
| Cow position: | chr29:15948846-15948583 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 517-773 |
| Cow position: | chr29:32540780-32541034 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 551-773 |
| Cow position: | chr29:646520-646736 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 559-772 |
| Cow position: | chr29:21264673-21264880 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 565-773 |
| Cow position: | chr29:19622547-19622343 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 607-773 |
| Cow position: | chr29:45205274-45205443 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.