Cow genome map
| Conread name: | Lng1-LNG010059B05 | 
| Conread position: | 1-382 | 
| Cow position: | chr3:77423888-77424271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 52 | 
| Conread position: | 1-490 | 
| Cow position: | chr3:6878967-6878496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 24 | 
| Conread position: | 6-399 | 
| Cow position: | chr3:4027828-4028224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 165 | 
| Conread position: | 25-773 | 
| Cow position: | chr3:58947729-58948471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 764 | 
| Alignm identity: | 567 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 38 | 
| Conread position: | 40-772 | 
| Cow position: | chr3:42053043-42052303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 764 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 54 | 
| Conread position: | 43-773 | 
| Cow position: | chr3:6685919-6686663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 755 | 
| Alignm identity: | 577 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 49 | 
| Conread position: | 44-265 | 
| Cow position: | chr3:19944166-19944392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 48-497 | 
| Cow position: | chr3:15178830-15179281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 39 | 
| Conread position: | 49-468 | 
| Cow position: | chr3:26836635-26836258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 61, 46 | 
| Conread position: | 49-574 | 
| Cow position: | chr3:52864014-52863471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 190 | 
| Conread position: | 49-755 | 
| Cow position: | chr3:48230333-48229641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 726 | 
| Alignm identity: | 531 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 5 | 
| Conread position: | 79-309 | 
| Cow position: | chr3:18728612-18728389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 150, 37 | 
| Conread position: | 93-756 | 
| Cow position: | chr3:18463392-18462731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 45 | 
| Conread position: | 96-773 | 
| Cow position: | chr3:50915501-50916193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 698 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 220 | 
| Conread position: | 97-773 | 
| Cow position: | chr3:49677974-49678657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 530 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 24 | 
| Conread position: | 99-247 | 
| Cow position: | chr3:26822328-26822178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 26, 6 | 
| Conread position: | 99-463 | 
| Cow position: | chr3:36881741-36881367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 25 | 
| Conread position: | 99-568 | 
| Cow position: | chr3:49333965-49334438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 19 | 
| Conread position: | 99-748 | 
| Cow position: | chr3:64017184-64016533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 493 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 6 | 
| Conread position: | 99-772 | 
| Cow position: | chr3:18811681-18812360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 21 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:5954005-5953326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 495 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 6 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:10239834-10240512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 21 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:19756778-19756093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 25 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:21182506-21181845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 688 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:23290161-23289479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 521 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 40 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:34030718-34030049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 506 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:40823568-40824244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 521 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:45774232-45773550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 698 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 40 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:49545026-49544354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:53515794-53516468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 688 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:57484549-57483874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 519 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 6 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:59861547-59862228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:75040989-75040305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 523 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 99-773 | 
| Cow position: | chr3:78027229-78026564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 688 | 
| Alignm identity: | 518 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 100-773 | 
| Cow position: | chr3:63003367-63002688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 511 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 37 | 
| Conread position: | 103-223 | 
| Cow position: | chr3:40157327-40157204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 103-773 | 
| Cow position: | chr3:66620355-66621038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 36 | 
| Conread position: | 105-222 | 
| Cow position: | chr3:41000295-41000414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 20, 11 | 
| Conread position: | 105-263 | 
| Cow position: | chr3:55229515-55229355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 34, 153 | 
| Conread position: | 105-771 | 
| Cow position: | chr3:7481046-7480375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 679 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 32 | 
| Conread position: | 105-773 | 
| Cow position: | chr3:42432417-42433074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 149 | 
| Conread position: | 105-773 | 
| Cow position: | chr3:45895372-45894696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 119 | 
| Conread position: | 105-773 | 
| Cow position: | chr3:45974683-45975358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 119 | 
| Conread position: | 105-773 | 
| Cow position: | chr3:46502719-46503402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 689 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 316 | 
| Conread position: | 106-772 | 
| Cow position: | chr3:30314756-30315415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 683 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 15 | 
| Conread position: | 115-773 | 
| Cow position: | chr3:72630265-72630929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 506 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 32 | 
| Conread position: | 116-515 | 
| Cow position: | chr3:50011867-50012269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 290 | 
| Conread position: | 116-773 | 
| Cow position: | chr3:23213876-23213221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 496 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 59 | 
| Conread position: | 116-773 | 
| Cow position: | chr3:56340230-56339563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 676 | 
| Alignm identity: | 503 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 288 | 
| Conread position: | 117-672 | 
| Cow position: | chr3:14439570-14439011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 322 | 
| Conread position: | 117-771 | 
| Cow position: | chr3:6782575-6783219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 468 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 219 | 
| Conread position: | 117-771 | 
| Cow position: | chr3:45032932-45033601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 498 | 
| Conread position: | 117-771 | 
| Cow position: | chr3:64650817-64651482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 484 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 487 | 
| Conread position: | 119-771 | 
| Cow position: | chr3:2917652-2918316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 93 | 
| Conread position: | 127-771 | 
| Cow position: | chr3:68873554-68872902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 297 | 
| Conread position: | 130-771 | 
| Cow position: | chr3:20380747-20381396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 483 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 307 | 
| Conread position: | 137-771 | 
| Cow position: | chr3:24314678-24315323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 217 | 
| Conread position: | 151-773 | 
| Cow position: | chr3:19939104-19939748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 472 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 187 | 
| Conread position: | 167-773 | 
| Cow position: | chr3:29578876-29579480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 471 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 261 | 
| Conread position: | 174-594 | 
| Cow position: | chr3:52654613-52654200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 55, 81 | 
| Conread position: | 257-773 | 
| Cow position: | chr3:2710531-2710013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 235 | 
| Conread position: | 258-773 | 
| Cow position: | chr3:50127316-50126771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 190 | 
| Conread position: | 261-762 | 
| Cow position: | chr3:6661142-6661641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 57, 68 | 
| Conread position: | 273-773 | 
| Cow position: | chr3:19944607-19945085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 279, 204 | 
| Conread position: | 301-771 | 
| Cow position: | chr3:64357409-64356941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 162 | 
| Conread position: | 307-765 | 
| Cow position: | chr3:38493638-38494083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 167 | 
| Conread position: | 314-774 | 
| Cow position: | chr3:56397593-56398045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 470 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 129, 77 | 
| Conread position: | 341-673 | 
| Cow position: | chr3:24589584-24589253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 16 | 
| Conread position: | 367-771 | 
| Cow position: | chr3:7169656-7170053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 114 | 
| Conread position: | 384-773 | 
| Cow position: | chr3:42447570-42447963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 217 | 
| Conread position: | 396-695 | 
| Cow position: | chr3:4028365-4028673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 36 | 
| Conread position: | 431-731 | 
| Cow position: | chr3:56145797-56146100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 168 | 
| Conread position: | 450-773 | 
| Cow position: | chr3:3841273-3840954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 147 | 
| Conread position: | 458-761 | 
| Cow position: | chr3:53411725-53412011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 62, 126 | 
| Conread position: | 488-771 | 
| Cow position: | chr3:56098788-56099073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 56, 109 | 
| Conread position: | 490-774 | 
| Cow position: | chr3:34845712-34846002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 51, 104 | 
| Conread position: | 496-766 | 
| Cow position: | chr3:46016344-46016608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 24, 102 | 
| Conread position: | 511-771 | 
| Cow position: | chr3:2869375-2869633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 27, 6 | 
| Conread position: | 511-771 | 
| Cow position: | chr3:18355673-18355418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 9, 27 | 
| Conread position: | 517-773 | 
| Cow position: | chr3:3057444-3057687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 21, 11 | 
| Conread position: | 529-773 | 
| Cow position: | chr3:48058742-48058499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 12, 67 | 
| Conread position: | 536-771 | 
| Cow position: | chr3:4286705-4286938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 136, 63 | 
| Conread position: | 537-771 | 
| Cow position: | chr3:63915494-63915262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 135, 61 | 
| Conread position: | 537-773 | 
| Cow position: | chr3:6877545-6877318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 138, 25 | 
| Conread position: | 555-773 | 
| Cow position: | chr3:5994449-5994233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 117, 42 | 
| Conread position: | 611-773 | 
| Cow position: | chr3:83294218-83294056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 64, 95 | 
| Conread position: | 617-773 | 
| Cow position: | chr3:24445380-24445226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 55, 103 | 
| Conread position: | 627-773 | 
| Cow position: | chr3:77424343-77424490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 53, 139 | 
| Conread position: | 663-771 | 
| Cow position: | chr3:24589022-24588913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 17, 0 | 
Show alignments to all cow chromosomes.
