Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 52
               

               Conread position:
               1-490
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 24
               

               Conread position:
               6-399
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 165
               

               Conread position:
               25-773
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               40-772
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               43-773
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               44-265
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               48-497
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               49-468
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               49-574
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 190
               

               Conread position:
               49-755
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 5
               

               Conread position:
               79-309
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               150, 37
               

               Conread position:
               93-756
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 45
               

               Conread position:
               96-773
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 220
               

               Conread position:
               97-773
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               99-247
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               99-463
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               99-568
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               99-748
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 6
               

               Conread position:
               99-772
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 40
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               103-223
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               105-222
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               105-263
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 153
               

               Conread position:
               105-771
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 149
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 119
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 119
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 316
               

               Conread position:
               106-772
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               115-773
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               116-515
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 290
               

               Conread position:
               116-773
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               116-773
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 288
               

               Conread position:
               117-672
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 322
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 219
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 498
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 487
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 297
               

               Conread position:
               130-771
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 307
               

               Conread position:
               137-771
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 217
               

               Conread position:
               151-773
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 187
               

               Conread position:
               167-773
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 261
               

               Conread position:
               174-594
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               257-773
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 235
               

               Conread position:
               258-773
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 190
               

               Conread position:
               261-762
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 68
               

               Conread position:
               273-773
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 204
               

               Conread position:
               301-771
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 162
               

               Conread position:
               307-765
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 167
               

               Conread position:
               314-774
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               299
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               129, 77
               

               Conread position:
               341-673
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               367-771
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 114
               

               Conread position:
               384-773
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 217
               

               Conread position:
               396-695
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               431-731
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 168
               

               Conread position:
               450-773
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 147
               

               Conread position:
               458-761
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               488-771
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               56, 109
               

               Conread position:
               490-774
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               51, 104
               

               Conread position:
               496-766
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               511-771
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               511-771
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               517-773
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               529-773
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               536-771
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               136, 63
               

               Conread position:
               537-771
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               135, 61
               

               Conread position:
               537-773
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               555-773
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               117, 42
               

               Conread position:
               611-773
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               617-773
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 103
               

               Conread position:
               627-773
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               663-771
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.