Cow genome map
Conread name: | Lng1-LNG010059B05 |
Conread position: | 1-382 |
Cow position: | chr3:77423888-77424271 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 52 |
Conread position: | 1-490 |
Cow position: | chr3:6878967-6878496 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 24 |
Conread position: | 6-399 |
Cow position: | chr3:4027828-4028224 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 165 |
Conread position: | 25-773 |
Cow position: | chr3:58947729-58948471 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 38 |
Conread position: | 40-772 |
Cow position: | chr3:42053043-42052303 (view UCSC Genome Browser custom track) |
Alignm length: | 764 |
Alignm identity: | 491 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 54 |
Conread position: | 43-773 |
Cow position: | chr3:6685919-6686663 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 577 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 44-265 |
Cow position: | chr3:19944166-19944392 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 160 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 48-497 |
Cow position: | chr3:15178830-15179281 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 39 |
Conread position: | 49-468 |
Cow position: | chr3:26836635-26836258 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 296 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 61, 46 |
Conread position: | 49-574 |
Cow position: | chr3:52864014-52863471 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 190 |
Conread position: | 49-755 |
Cow position: | chr3:48230333-48229641 (view UCSC Genome Browser custom track) |
Alignm length: | 726 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 5 |
Conread position: | 79-309 |
Cow position: | chr3:18728612-18728389 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 161 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 150, 37 |
Conread position: | 93-756 |
Cow position: | chr3:18463392-18462731 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 45 |
Conread position: | 96-773 |
Cow position: | chr3:50915501-50916193 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 220 |
Conread position: | 97-773 |
Cow position: | chr3:49677974-49678657 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 530 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 24 |
Conread position: | 99-247 |
Cow position: | chr3:26822328-26822178 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 26, 6 |
Conread position: | 99-463 |
Cow position: | chr3:36881741-36881367 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 25 |
Conread position: | 99-568 |
Cow position: | chr3:49333965-49334438 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 19 |
Conread position: | 99-748 |
Cow position: | chr3:64017184-64016533 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 493 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 6 |
Conread position: | 99-772 |
Cow position: | chr3:18811681-18812360 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 21 |
Conread position: | 99-773 |
Cow position: | chr3:5954005-5953326 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 6 |
Conread position: | 99-773 |
Cow position: | chr3:10239834-10240512 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 21 |
Conread position: | 99-773 |
Cow position: | chr3:19756778-19756093 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 25 |
Conread position: | 99-773 |
Cow position: | chr3:21182506-21181845 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr3:23290161-23289479 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 40 |
Conread position: | 99-773 |
Cow position: | chr3:34030718-34030049 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr3:40823568-40824244 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr3:45774232-45773550 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 40 |
Conread position: | 99-773 |
Cow position: | chr3:49545026-49544354 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr3:53515794-53516468 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr3:57484549-57483874 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 6 |
Conread position: | 99-773 |
Cow position: | chr3:59861547-59862228 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 23 |
Conread position: | 99-773 |
Cow position: | chr3:75040989-75040305 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 99-773 |
Cow position: | chr3:78027229-78026564 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 23 |
Conread position: | 100-773 |
Cow position: | chr3:63003367-63002688 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 37 |
Conread position: | 103-223 |
Cow position: | chr3:40157327-40157204 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 103-773 |
Cow position: | chr3:66620355-66621038 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 36 |
Conread position: | 105-222 |
Cow position: | chr3:41000295-41000414 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 11 |
Conread position: | 105-263 |
Cow position: | chr3:55229515-55229355 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 34, 153 |
Conread position: | 105-771 |
Cow position: | chr3:7481046-7480375 (view UCSC Genome Browser custom track) |
Alignm length: | 679 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 32 |
Conread position: | 105-773 |
Cow position: | chr3:42432417-42433074 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 149 |
Conread position: | 105-773 |
Cow position: | chr3:45895372-45894696 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 119 |
Conread position: | 105-773 |
Cow position: | chr3:45974683-45975358 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 119 |
Conread position: | 105-773 |
Cow position: | chr3:46502719-46503402 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 316 |
Conread position: | 106-772 |
Cow position: | chr3:30314756-30315415 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 15 |
Conread position: | 115-773 |
Cow position: | chr3:72630265-72630929 (view UCSC Genome Browser custom track) |
Alignm length: | 674 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 32 |
Conread position: | 116-515 |
Cow position: | chr3:50011867-50012269 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 290 |
Conread position: | 116-773 |
Cow position: | chr3:23213876-23213221 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 59 |
Conread position: | 116-773 |
Cow position: | chr3:56340230-56339563 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 288 |
Conread position: | 117-672 |
Cow position: | chr3:14439570-14439011 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 409 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 322 |
Conread position: | 117-771 |
Cow position: | chr3:6782575-6783219 (view UCSC Genome Browser custom track) |
Alignm length: | 666 |
Alignm identity: | 468 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 219 |
Conread position: | 117-771 |
Cow position: | chr3:45032932-45033601 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 498 |
Conread position: | 117-771 |
Cow position: | chr3:64650817-64651482 (view UCSC Genome Browser custom track) |
Alignm length: | 670 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 487 |
Conread position: | 119-771 |
Cow position: | chr3:2917652-2918316 (view UCSC Genome Browser custom track) |
Alignm length: | 669 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 93 |
Conread position: | 127-771 |
Cow position: | chr3:68873554-68872902 (view UCSC Genome Browser custom track) |
Alignm length: | 661 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 297 |
Conread position: | 130-771 |
Cow position: | chr3:20380747-20381396 (view UCSC Genome Browser custom track) |
Alignm length: | 656 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 307 |
Conread position: | 137-771 |
Cow position: | chr3:24314678-24315323 (view UCSC Genome Browser custom track) |
Alignm length: | 650 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 217 |
Conread position: | 151-773 |
Cow position: | chr3:19939104-19939748 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 187 |
Conread position: | 167-773 |
Cow position: | chr3:29578876-29579480 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 261 |
Conread position: | 174-594 |
Cow position: | chr3:52654613-52654200 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 289 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 55, 81 |
Conread position: | 257-773 |
Cow position: | chr3:2710531-2710013 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 390 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 235 |
Conread position: | 258-773 |
Cow position: | chr3:50127316-50126771 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 190 |
Conread position: | 261-762 |
Cow position: | chr3:6661142-6661641 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 329 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 57, 68 |
Conread position: | 273-773 |
Cow position: | chr3:19944607-19945085 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 204 |
Conread position: | 301-771 |
Cow position: | chr3:64357409-64356941 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 162 |
Conread position: | 307-765 |
Cow position: | chr3:38493638-38494083 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 167 |
Conread position: | 314-774 |
Cow position: | chr3:56397593-56398045 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 299 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 129, 77 |
Conread position: | 341-673 |
Cow position: | chr3:24589584-24589253 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 16 |
Conread position: | 367-771 |
Cow position: | chr3:7169656-7170053 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 114 |
Conread position: | 384-773 |
Cow position: | chr3:42447570-42447963 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 217 |
Conread position: | 396-695 |
Cow position: | chr3:4028365-4028673 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 36 |
Conread position: | 431-731 |
Cow position: | chr3:56145797-56146100 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 168 |
Conread position: | 450-773 |
Cow position: | chr3:3841273-3840954 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 147 |
Conread position: | 458-761 |
Cow position: | chr3:53411725-53412011 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 207 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 62, 126 |
Conread position: | 488-771 |
Cow position: | chr3:56098788-56099073 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 201 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 56, 109 |
Conread position: | 490-774 |
Cow position: | chr3:34845712-34846002 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 210 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 51, 104 |
Conread position: | 496-766 |
Cow position: | chr3:46016344-46016608 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 190 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 24, 102 |
Conread position: | 511-771 |
Cow position: | chr3:2869375-2869633 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 186 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 27, 6 |
Conread position: | 511-771 |
Cow position: | chr3:18355673-18355418 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 183 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 9, 27 |
Conread position: | 517-773 |
Cow position: | chr3:3057444-3057687 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 190 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 21, 11 |
Conread position: | 529-773 |
Cow position: | chr3:48058742-48058499 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 176 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 12, 67 |
Conread position: | 536-771 |
Cow position: | chr3:4286705-4286938 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 165 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 136, 63 |
Conread position: | 537-771 |
Cow position: | chr3:63915494-63915262 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 135, 61 |
Conread position: | 537-773 |
Cow position: | chr3:6877545-6877318 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 175 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 138, 25 |
Conread position: | 555-773 |
Cow position: | chr3:5994449-5994233 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 156 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 117, 42 |
Conread position: | 611-773 |
Cow position: | chr3:83294218-83294056 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 118 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 64, 95 |
Conread position: | 617-773 |
Cow position: | chr3:24445380-24445226 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 55, 103 |
Conread position: | 627-773 |
Cow position: | chr3:77424343-77424490 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 53, 139 |
Conread position: | 663-771 |
Cow position: | chr3:24589022-24588913 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 88 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.