Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 8-532 |
| Cow position: | chr4:22472417-22472946 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 25-771 |
| Cow position: | chr4:46664415-46665176 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 595 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 48-750 |
| Cow position: | chr4:13869950-13870652 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 55-773 |
| Cow position: | chr4:60264229-60263503 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 131 |
| Conread position: | 56-768 |
| Cow position: | chr4:34184586-34183884 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 69-773 |
| Cow position: | chr4:61694544-61693877 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 24 |
| Conread position: | 91-378 |
| Cow position: | chr4:12607686-12607406 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 99-486 |
| Cow position: | chr4:14821562-14821177 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 48 |
| Conread position: | 99-747 |
| Cow position: | chr4:12241232-12240577 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 99-771 |
| Cow position: | chr4:36896353-36897033 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr4:6490379-6489701 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr4:25599516-25598834 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 99-773 |
| Cow position: | chr4:43319661-43318980 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr4:43881094-43881768 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr4:48026382-48027062 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 103-245 |
| Cow position: | chr4:66925984-66926130 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 103-773 |
| Cow position: | chr4:31565316-31564646 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 103-773 |
| Cow position: | chr4:31669259-31669935 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 105-589 |
| Cow position: | chr4:26886870-26886374 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 106-359 |
| Cow position: | chr4:33493818-33494072 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 108-749 |
| Cow position: | chr4:39271398-39270764 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 63 |
| Conread position: | 115-773 |
| Cow position: | chr4:18516896-18517561 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 169 |
| Conread position: | 117-777 |
| Cow position: | chr4:1930628-1929965 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 414 |
| Conread position: | 118-588 |
| Cow position: | chr4:16056598-16057079 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 119-771 |
| Cow position: | chr4:32212163-32212830 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 495 |
| Conread position: | 130-706 |
| Cow position: | chr4:16326766-16326179 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 482 |
| Conread position: | 166-773 |
| Cow position: | chr4:33072774-33072158 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 440 |
| Conread position: | 169-773 |
| Cow position: | chr4:13493365-13493981 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 86 |
| Conread position: | 174-773 |
| Cow position: | chr4:33595623-33596199 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 373 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 84, 55 |
| Conread position: | 239-773 |
| Cow position: | chr4:29531753-29531222 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 116 |
| Conread position: | 245-773 |
| Cow position: | chr4:62568560-62569095 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 254 |
| Conread position: | 295-770 |
| Cow position: | chr4:27301274-27300820 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 62 |
| Conread position: | 335-762 |
| Cow position: | chr4:41332930-41333354 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 269 |
| Conread position: | 357-771 |
| Cow position: | chr4:603258-603675 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 237 |
| Conread position: | 358-771 |
| Cow position: | chr4:58689847-58689431 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 361-749 |
| Cow position: | chr4:64854018-64853614 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 248 |
| Conread position: | 411-773 |
| Cow position: | chr4:10881847-10882209 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 189 |
| Conread position: | 429-660 |
| Cow position: | chr4:17365615-17365382 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 127 |
| Conread position: | 434-771 |
| Cow position: | chr4:18337184-18337523 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 165 |
| Conread position: | 459-750 |
| Cow position: | chr4:28831909-28832199 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 459-773 |
| Cow position: | chr4:20604079-20604386 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 483-740 |
| Cow position: | chr4:494208-493953 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 37, 115 |
| Conread position: | 488-773 |
| Cow position: | chr4:11110895-11110602 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 488-773 |
| Cow position: | chr4:17925581-17925302 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 115 |
| Conread position: | 504-773 |
| Cow position: | chr4:47254533-47254270 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 506-773 |
| Cow position: | chr4:1049863-1049602 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 520-773 |
| Cow position: | chr4:6206007-6206256 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 520-773 |
| Cow position: | chr4:16360321-16360574 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 526-771 |
| Cow position: | chr4:44726013-44726254 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 527-773 |
| Cow position: | chr4:67681609-67681854 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 528-773 |
| Cow position: | chr4:22473774-22474011 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 147, 9 |
| Conread position: | 551-773 |
| Cow position: | chr4:16639053-16639273 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 616-773 |
| Cow position: | chr4:19006052-19005894 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 617-771 |
| Cow position: | chr4:44780720-44780565 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 618-773 |
| Cow position: | chr4:45298579-45298423 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 652-773 |
| Cow position: | chr4:49716216-49716338 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.