Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               3-425
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               81, 121
               

               Conread position:
               50-272
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               52-774
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               446
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 9
               

               Conread position:
               55-773
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               66-591
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               96-771
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 515
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               99-432
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-756
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               99-762
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 6
               

               Conread position:
               101-751
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               105-223
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-253
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               27, 143
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 184
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 434
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               109-756
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               115-762
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               116-750
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 22
               

               Conread position:
               121-664
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 203
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               127-773
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 172
               

               Conread position:
               127-773
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 204
               

               Conread position:
               132-593
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               137-767
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 272
               

               Conread position:
               140-767
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 168
               

               Conread position:
               163-752
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 202
               

               Conread position:
               166-773
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 250
               

               Conread position:
               168-771
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 83
               

               Conread position:
               168-773
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 84
               

               Conread position:
               170-773
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               175-770
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 443
               

               Conread position:
               232-773
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 72
               

               Conread position:
               236-773
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 32
               

               Conread position:
               262-767
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 37
               

               Conread position:
               273-585
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 0
               

               Conread position:
               273-773
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 124
               

               Conread position:
               282-696
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 59
               

               Conread position:
               298-773
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 138
               

               Conread position:
               321-590
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               344-771
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 237
               

               Conread position:
               381-773
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 118
               

               Conread position:
               396-773
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 205
               

               Conread position:
               422-773
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 180
               

               Conread position:
               431-717
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               432-773
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               440-588
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               474-703
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               474-772
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               486-773
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               6, 112
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               33, 107
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 109
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 111
               

               Conread position:
               496-773
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               25, 101
               

               Conread position:
               509-773
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               510-771
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               511-771
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 6
               

               Conread position:
               517-728
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               517-771
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               517-773
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               524-773
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               537-762
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               135, 62
               

               Conread position:
               548-773
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               556-758
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               116, 40
               

               Conread position:
               559-773
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 38
               

               Conread position:
               596-777
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               611-765
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 47
               

               Conread position:
               619-773
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.