Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               7-499
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               24-464
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               25-408
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               35-412
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               37-273
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               48-266
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               49-771
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 164
               

               Conread position:
               49-771
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               55-176
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               55-326
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               56-773
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               557
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               97-773
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 15
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               98-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               99-512
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 6
               

               Conread position:
               99-772
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               105-242
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-499
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               105-750
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 242
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               115-672
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               115-773
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 182
               

               Conread position:
               139-773
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 94
               

               Conread position:
               143-773
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 221
               

               Conread position:
               151-773
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 309
               

               Conread position:
               154-774
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               157-593
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               169-773
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 262
               

               Conread position:
               171-771
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               174-594
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 141
               

               Conread position:
               174-773
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               176-768
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               387
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 17
               

               Conread position:
               177-773
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 113
               

               Conread position:
               227-774
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               245-769
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               339
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               275, 54
               

               Conread position:
               319-773
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               326-771
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 39
               

               Conread position:
               380-744
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               380-749
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               86, 46
               

               Conread position:
               380-773
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 222
               

               Conread position:
               396-773
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               69, 151
               

               Conread position:
               408-645
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               59, 190
               

               Conread position:
               417-773
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 126
               

               Conread position:
               419-761
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               461-773
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               60, 268
               

               Conread position:
               470-720
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               49, 136
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 109
               

               Conread position:
               488-773
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 40
               

               Conread position:
               490-773
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 110
               

               Conread position:
               496-773
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               502-771
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               515-773
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               517-771
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               517-773
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               528-773
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               528-773
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               530-772
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 13
               

               Conread position:
               543-773
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               563-773
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               77, 34
               

               Conread position:
               564-750
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               593-773
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               598-774
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 39
               

               Conread position:
               611-773
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               634-770
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 16
               
Show alignments to all cow chromosomes.