Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 7-499 |
| Cow position: | chr7:29370082-29369577 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 24-464 |
| Cow position: | chr7:21310731-21311160 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 25-408 |
| Cow position: | chr7:20820948-20821332 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 35-412 |
| Cow position: | chr7:4415612-4416004 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 37-273 |
| Cow position: | chr7:55280092-55279857 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 48-266 |
| Cow position: | chr7:54644261-54644035 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 49-771 |
| Cow position: | chr7:48634685-48635412 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 164 |
| Conread position: | 49-771 |
| Cow position: | chr7:51014518-51015252 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 55-176 |
| Cow position: | chr7:6488204-6488079 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 55-326 |
| Cow position: | chr7:59683540-59683811 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 56-773 |
| Cow position: | chr7:29470728-29471449 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 97-773 |
| Cow position: | chr7:24057746-24058430 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 15 |
| Conread position: | 98-773 |
| Cow position: | chr7:8144933-8144244 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 98-773 |
| Cow position: | chr7:21127352-21126673 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 99-512 |
| Cow position: | chr7:68232252-68232658 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 6 |
| Conread position: | 99-772 |
| Cow position: | chr7:14139289-14138608 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 99-773 |
| Cow position: | chr7:21234700-21234021 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr7:24808153-24807468 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr7:33405930-33405254 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 99-773 |
| Cow position: | chr7:34486226-34486905 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr7:45948840-45948155 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr7:46901769-46901091 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 6 |
| Conread position: | 100-773 |
| Cow position: | chr7:10431105-10430434 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 105-242 |
| Cow position: | chr7:1610894-1610754 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 105-499 |
| Cow position: | chr7:5662690-5663080 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 46 |
| Conread position: | 105-750 |
| Cow position: | chr7:21929459-21930115 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 105-773 |
| Cow position: | chr7:27786937-27787620 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 242 |
| Conread position: | 105-773 |
| Cow position: | chr7:67799168-67799814 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 115-672 |
| Cow position: | chr7:25250424-25250993 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 115-773 |
| Cow position: | chr7:55537592-55536935 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 119-771 |
| Cow position: | chr7:3300834-3300169 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 182 |
| Conread position: | 139-773 |
| Cow position: | chr7:59679200-59679836 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 143-773 |
| Cow position: | chr7:38397167-38397804 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 221 |
| Conread position: | 151-773 |
| Cow position: | chr7:994879-995505 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 309 |
| Conread position: | 154-774 |
| Cow position: | chr7:21853460-21852844 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 157-593 |
| Cow position: | chr7:27127706-27128142 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 169-773 |
| Cow position: | chr7:525353-525965 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 262 |
| Conread position: | 171-771 |
| Cow position: | chr7:68480938-68481532 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 174-594 |
| Cow position: | chr7:68333370-68333795 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 174-773 |
| Cow position: | chr7:7211601-7211007 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 176-768 |
| Cow position: | chr7:65458784-65458204 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 387 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 177-773 |
| Cow position: | chr7:63386124-63386717 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 113 |
| Conread position: | 227-774 |
| Cow position: | chr7:39555021-39554486 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 18 |
| Conread position: | 245-769 |
| Cow position: | chr7:40269491-40269009 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 339 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 275, 54 |
| Conread position: | 319-773 |
| Cow position: | chr7:15810949-15810469 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 326-771 |
| Cow position: | chr7:545380-545830 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 380-744 |
| Cow position: | chr7:53407223-53407576 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 380-749 |
| Cow position: | chr7:63555555-63555922 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 86, 46 |
| Conread position: | 380-773 |
| Cow position: | chr7:61578048-61578444 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 222 |
| Conread position: | 396-773 |
| Cow position: | chr7:67489315-67489697 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 151 |
| Conread position: | 408-645 |
| Cow position: | chr7:1610095-1609852 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 59, 190 |
| Conread position: | 417-773 |
| Cow position: | chr7:59683819-59684170 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 419-761 |
| Cow position: | chr7:59138291-59138634 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 461-773 |
| Cow position: | chr7:13533233-13532914 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 60, 268 |
| Conread position: | 470-720 |
| Cow position: | chr7:21311127-21311374 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 136 |
| Conread position: | 488-773 |
| Cow position: | chr7:64240305-64240014 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 109 |
| Conread position: | 488-773 |
| Cow position: | chr7:67429279-67429560 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 490-773 |
| Cow position: | chr7:29369317-29369036 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 496-773 |
| Cow position: | chr7:5309395-5309124 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 502-771 |
| Cow position: | chr7:44910759-44910495 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 515-773 |
| Cow position: | chr7:21986159-21986415 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 517-771 |
| Cow position: | chr7:11463312-11463059 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 517-773 |
| Cow position: | chr7:445606-445359 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 528-773 |
| Cow position: | chr7:1452388-1452631 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 528-773 |
| Cow position: | chr7:19269683-19269443 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 530-772 |
| Cow position: | chr7:67494857-67495089 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 13 |
| Conread position: | 543-773 |
| Cow position: | chr7:42870905-42871130 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 563-773 |
| Cow position: | chr7:52803879-52803675 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 77, 34 |
| Conread position: | 564-750 |
| Cow position: | chr7:54671300-54671115 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 33 |
| Conread position: | 593-773 |
| Cow position: | chr7:3156269-3156457 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 598-774 |
| Cow position: | chr7:67675910-67676086 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 611-773 |
| Cow position: | chr7:33332392-33332549 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 634-770 |
| Cow position: | chr7:19989877-19990014 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 16 |
Show alignments to all cow chromosomes.