Cow genome map
| Conread name: | Lng1-LNG010059B05 |
| Conread position: | 4-525 |
| Cow position: | chr8:45160669-45160131 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 14-360 |
| Cow position: | chr8:61034614-61034257 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 24-549 |
| Cow position: | chr8:42468157-42468677 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 9 |
| Conread position: | 25-580 |
| Cow position: | chr8:42160996-42160440 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 23 |
| Conread position: | 49-498 |
| Cow position: | chr8:58186758-58186310 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 42 |
| Conread position: | 49-547 |
| Cow position: | chr8:24419757-24419268 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 46 |
| Conread position: | 49-773 |
| Cow position: | chr8:11969830-11969106 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 50-773 |
| Cow position: | chr8:38606756-38606026 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 42 |
| Conread position: | 96-771 |
| Cow position: | chr8:4686891-4687577 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 99-223 |
| Cow position: | chr8:27925814-27925941 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 99-454 |
| Cow position: | chr8:42658357-42657997 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 99-589 |
| Cow position: | chr8:36636045-36635547 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-658 |
| Cow position: | chr8:12449447-12450014 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 99-767 |
| Cow position: | chr8:23771134-23771807 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-771 |
| Cow position: | chr8:49214926-49215616 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr8:3856517-3855848 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 99-773 |
| Cow position: | chr8:5016680-5017356 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr8:11832199-11832886 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 99-773 |
| Cow position: | chr8:17311517-17312200 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 99-773 |
| Cow position: | chr8:32319050-32318375 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr8:39195718-39195038 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr8:42484411-42485093 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 99-773 |
| Cow position: | chr8:47661826-47661143 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 99-773 |
| Cow position: | chr8:60060879-60061560 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 100-773 |
| Cow position: | chr8:7161392-7162074 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 100-773 |
| Cow position: | chr8:19050976-19051653 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 103-320 |
| Cow position: | chr8:12717467-12717682 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 14, 151 |
| Conread position: | 103-773 |
| Cow position: | chr8:14591401-14590725 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 103-773 |
| Cow position: | chr8:42419934-42419262 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 105-368 |
| Cow position: | chr8:8229277-8229012 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 219 |
| Conread position: | 105-673 |
| Cow position: | chr8:46944415-46943832 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 490 |
| Conread position: | 105-773 |
| Cow position: | chr8:2170875-2170197 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 336 |
| Conread position: | 105-773 |
| Cow position: | chr8:11802324-11802999 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 149 |
| Conread position: | 106-773 |
| Cow position: | chr8:25776166-25775499 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 108-773 |
| Cow position: | chr8:8911014-8911678 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 115-773 |
| Cow position: | chr8:24915824-24915159 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 115-773 |
| Cow position: | chr8:33588887-33589552 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 490 |
| Conread position: | 115-773 |
| Cow position: | chr8:50994299-50994947 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 116-281 |
| Cow position: | chr8:33430915-33431083 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 116-589 |
| Cow position: | chr8:47074778-47075262 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 117-771 |
| Cow position: | chr8:1319554-1320216 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 117-771 |
| Cow position: | chr8:2886260-2886922 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 137 |
| Conread position: | 119-771 |
| Cow position: | chr8:30891806-30891141 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 119-771 |
| Cow position: | chr8:47069296-47068638 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 499 |
| Conread position: | 121-771 |
| Cow position: | chr8:25408245-25408902 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 127-771 |
| Cow position: | chr8:34348197-34348848 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 309 |
| Conread position: | 132-773 |
| Cow position: | chr8:50930600-50929953 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 284 |
| Conread position: | 142-771 |
| Cow position: | chr8:8315913-8315286 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 314 |
| Conread position: | 142-774 |
| Cow position: | chr8:30487849-30487206 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 395 |
| Conread position: | 163-773 |
| Cow position: | chr8:14928321-14927702 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 445 |
| Conread position: | 167-674 |
| Cow position: | chr8:25436851-25437343 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 27 |
| Conread position: | 169-773 |
| Cow position: | chr8:50288357-50287748 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 82 |
| Conread position: | 170-771 |
| Cow position: | chr8:8401545-8400941 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 243 |
| Conread position: | 187-773 |
| Cow position: | chr8:11762526-11763117 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 236-773 |
| Cow position: | chr8:46050820-46051364 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 99 |
| Conread position: | 259-671 |
| Cow position: | chr8:25376416-25376834 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 6 |
| Conread position: | 261-770 |
| Cow position: | chr8:9964798-9964296 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 343 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 264-754 |
| Cow position: | chr8:8308256-8308752 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 287 |
| Conread position: | 271-773 |
| Cow position: | chr8:59262252-59261742 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 335 |
| Conread position: | 294-773 |
| Cow position: | chr8:28878406-28877927 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 173 |
| Conread position: | 297-773 |
| Cow position: | chr8:45692321-45691845 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 309-771 |
| Cow position: | chr8:56883218-56883675 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 405-773 |
| Cow position: | chr8:46147530-46147164 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 411-771 |
| Cow position: | chr8:49859950-49859588 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 175 |
| Conread position: | 420-773 |
| Cow position: | chr8:42579763-42579402 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 474-771 |
| Cow position: | chr8:61906037-61906334 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 47, 130 |
| Conread position: | 497-773 |
| Cow position: | chr8:25417954-25417680 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 11, 104 |
| Conread position: | 502-750 |
| Cow position: | chr8:38391565-38391811 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 537-773 |
| Cow position: | chr8:41644723-41644495 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 559-728 |
| Cow position: | chr8:46952898-46952731 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 559-776 |
| Cow position: | chr8:4785905-4785692 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 593-773 |
| Cow position: | chr8:42158990-42158810 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 611-773 |
| Cow position: | chr8:42468677-42468839 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 78 |
| Conread position: | 611-773 |
| Cow position: | chr8:51666810-51666646 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 617-773 |
| Cow position: | chr8:19330733-19330889 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 12 |
Show alignments to all cow chromosomes.