Cow genome map


           Conread name:
           Lng1-LNG010059B05
        

               Conread position:
               4-525
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 27
               

               Conread position:
               14-360
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               24-549
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 9
               

               Conread position:
               25-580
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 23
               

               Conread position:
               49-498
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 42
               

               Conread position:
               49-547
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 46
               

               Conread position:
               49-773
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 103
               

               Conread position:
               50-773
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               96-771
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               99-223
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               99-454
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               99-589
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-658
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               99-767
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-771
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 6
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 49
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               99-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               100-773
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               103-320
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               103-773
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               105-368
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 219
               

               Conread position:
               105-673
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 490
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 336
               

               Conread position:
               105-773
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               106-773
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               108-773
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               115-773
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               115-773
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 490
               

               Conread position:
               115-773
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               116-281
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               116-589
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               117-771
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               119-771
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 499
               

               Conread position:
               121-771
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               127-771
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 309
               

               Conread position:
               132-773
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 284
               

               Conread position:
               142-771
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 314
               

               Conread position:
               142-774
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 395
               

               Conread position:
               163-773
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 445
               

               Conread position:
               167-674
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 27
               

               Conread position:
               169-773
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 82
               

               Conread position:
               170-771
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 243
               

               Conread position:
               187-773
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               236-773
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 99
               

               Conread position:
               259-671
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 6
               

               Conread position:
               261-770
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               343
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               38, 88
               

               Conread position:
               264-754
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 287
               

               Conread position:
               271-773
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 335
               

               Conread position:
               294-773
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 173
               

               Conread position:
               297-773
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               309-771
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               405-773
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               411-771
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 175
               

               Conread position:
               420-773
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               56, 44
               

               Conread position:
               474-771
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               47, 130
               

               Conread position:
               497-773
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               502-750
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               537-773
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               559-728
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               559-776
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               593-773
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               611-773
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               611-773
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               617-773
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               55, 12
               
Show alignments to all cow chromosomes.